Literature DB >> 16494446

Relationship between salt-bridge identity and 14-helix stability of beta3-peptides in aqueous buffer.

Danielle A Guarracino1, Hyojin R Chiang, Tereece N Banks, James D Lear, Michael E Hodsdon, Alanna Schepartz.   

Abstract

We report a systematic analysis of the relationship between salt bridge composition and 14-helix structure within a family of model beta-peptides in aqueous buffer. We find an inverse relationship between side-chain length and the extent of 14-helix structure as judged by CD. Introduction of a stabilizing salt bridge pair within a previously reported beta-peptide ligand for hDM2 led to changes in structure that were detectable by NMR.

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Year:  2006        PMID: 16494446     DOI: 10.1021/ol0527532

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  7 in total

Review 1.  Foldamers as versatile frameworks for the design and evolution of function.

Authors:  Catherine M Goodman; Sungwook Choi; Scott Shandler; William F DeGrado
Journal:  Nat Chem Biol       Date:  2007-05       Impact factor: 15.040

2.  Development of a rotamer library for use in beta-peptide foldamer computational design.

Authors:  Scott J Shandler; Maxim V Shapovalov; Roland L Dunbrack; William F DeGrado
Journal:  J Am Chem Soc       Date:  2010-06-02       Impact factor: 15.419

3.  Computational design of a self-assembling β-peptide oligomer.

Authors:  Ivan V Korendovych; Yong Ho Kim; Andrew H Ryan; James D Lear; William F Degrado; Scott J Shandler
Journal:  Org Lett       Date:  2010-10-14       Impact factor: 6.005

4.  Biophysical and structural characterization of a robust octameric beta-peptide bundle.

Authors:  Jessica L Goodman; E James Petersson; Douglas S Daniels; Jade X Qiu; Alanna Schepartz
Journal:  J Am Chem Soc       Date:  2007-11-07       Impact factor: 15.419

5.  Tetrameric beta(3)-peptide bundles.

Authors:  Jessica L Goodman; Matthew A Molski; Jade Qiu; Alanna Schepartz
Journal:  Chembiochem       Date:  2008-07-02       Impact factor: 3.164

6.  Comparison of design strategies for promotion of beta-peptide 14-helix stability in water.

Authors:  Esther Vaz; William C Pomerantz; Matthias Geyer; Samuel H Gellman; Luc Brunsveld
Journal:  Chembiochem       Date:  2008-09-22       Impact factor: 3.164

7.  Positive allostery in metal ion binding by a cooperatively folded β-peptide bundle.

Authors:  Jonathan P Miller; Michael S Melicher; Alanna Schepartz
Journal:  J Am Chem Soc       Date:  2014-10-07       Impact factor: 15.419

  7 in total

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