Literature DB >> 16486775

Functional subconformations in protein folding: evidence from single-channel experiments.

Lisen Kullman1, Philip A Gurnev, Mathias Winterhalter, Sergey M Bezrukov.   

Abstract

We study fluctuations in ion conductance and enzymatic rates of the sugar-specific channel-forming membrane protein, Maltoporin, at the single-molecule level. Specifically, we analyze time-persistent deviations in the transport parameters of individual channels from the multichannel averages and discuss our findings in the context of static disorder in protein folding. We show that the disorder responsible for variations in ion conductance does not affect sugar binding, suggesting that Maltoporin can exist in a wide set of fully functional, yet distinctly different, subconformations.

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Year:  2006        PMID: 16486775     DOI: 10.1103/PhysRevLett.96.038101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  12 in total

1.  Utilizing the information content in two-state trajectories.

Authors:  Ophir Flomenbom; Robert J Silbey
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-10       Impact factor: 11.205

2.  Stochastic sensing on a modular chip containing a single-ion channel.

Authors:  Ji Wook Shim; Li Qun Gu
Journal:  Anal Chem       Date:  2007-02-09       Impact factor: 6.986

3.  The interplay between cooperativity and diversity in model threshold ensembles.

Authors:  Javier Cervera; José A Manzanares; Salvador Mafe
Journal:  J R Soc Interface       Date:  2014-10-06       Impact factor: 4.118

4.  Polymer partitioning and ion selectivity suggest asymmetrical shape for the membrane pore formed by epsilon toxin.

Authors:  Ekaterina M Nestorovich; Vladimir A Karginov; Sergey M Bezrukov
Journal:  Biophys J       Date:  2010-08-04       Impact factor: 4.033

5.  Probing tubulin-blocked state of VDAC by varying membrane surface charge.

Authors:  Philip A Gurnev; Maria Queralt-Martin; Vicente M Aguilella; Tatiana K Rostovtseva; Sergey M Bezrukov
Journal:  Biophys J       Date:  2012-05-02       Impact factor: 4.033

6.  Search for cyclodextrin-based inhibitors of anthrax toxins: synthesis, structural features, and relative activities.

Authors:  Vladimir A Karginov; Ekaterina M Nestorovich; Adiamseged Yohannes; Tanisha M Robinson; Nour Eddine Fahmi; Frank Schmidtmann; Sidney M Hecht; Sergey M Bezrukov
Journal:  Antimicrob Agents Chemother       Date:  2006-09-18       Impact factor: 5.191

7.  Analysis of gating transitions among the three major open states of the OpdK channel.

Authors:  Belete R Cheneke; Bert van den Berg; Liviu Movileanu
Journal:  Biochemistry       Date:  2011-05-12       Impact factor: 3.162

8.  Osmotic stress regulates the strength and kinetics of sugar binding to the maltoporin channel.

Authors:  Philip A Gurnev; Daniel Harries; V Adrian Parsegian; Sergey M Bezrukov
Journal:  J Phys Condens Matter       Date:  2010-10-29       Impact factor: 2.333

9.  Diffusion, exclusion, and specific binding in a large channel: a study of OmpF selectivity inversion.

Authors:  Antonio Alcaraz; Ekaterina M Nestorovich; M Lidón López; Elena García-Giménez; Sergey M Bezrukov; Vicente M Aguilella
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

10.  Global redesign of a native β-barrel scaffold.

Authors:  Aaron J Wolfe; Mohammad M Mohammad; Avinash K Thakur; Liviu Movileanu
Journal:  Biochim Biophys Acta       Date:  2015-10-09
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