Literature DB >> 16483928

Model of formin-associated actin filament elongation.

Dimitrios Vavylonis1, David R Kovar, Ben O'Shaughnessy, Thomas D Pollard.   

Abstract

Formin FH2 domains associate processively with actin-filament barbed ends and modify their rate of growth. We modeled how the elongation rate depends on the concentrations of profilin and actin for four different formins. We assume that (1) FH2 domains are in rapid equilibrium among conformations that block or allow actin addition and that (2) profilin-actin is transferred rapidly to the barbed end from multiple profilin binding sites in formin FH1 domains. In agreement with previous experiments discussed below, we find an optimal profilin concentration with a maximal elongation rate that can exceed the rate of actin alone. High profilin concentrations suppress elongation, largely because free profilin displaces profilin-actin from FH1. The model supports a common polymerization mechanism for the four formin FH1FH2 constructs with differences attributed to varying parameter values. The mechanism does not require ATP hydrolysis by polymerized actin, but we cannot exclude that formins accelerate hydrolysis.

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Year:  2006        PMID: 16483928      PMCID: PMC3716371          DOI: 10.1016/j.molcel.2006.01.016

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  68 in total

1.  Formin is a processive motor that requires profilin to accelerate actin assembly and associated ATP hydrolysis.

Authors:  Stéphane Romero; Christophe Le Clainche; Dominique Didry; Coumaran Egile; Dominique Pantaloni; Marie-France Carlier
Journal:  Cell       Date:  2004-10-29       Impact factor: 41.582

2.  Atomic model of the actin filament.

Authors:  K C Holmes; D Popp; W Gebhard; W Kabsch
Journal:  Nature       Date:  1990-09-06       Impact factor: 49.962

3.  Elongation of actin filaments is a diffusion-limited reaction at the barbed end and is accelerated by inert macromolecules.

Authors:  D Drenckhahn; T D Pollard
Journal:  J Biol Chem       Date:  1986-09-25       Impact factor: 5.157

Review 4.  Regulation of microtubule and actin filament assembly--disassembly by associated small and large molecules.

Authors:  T L Hill; M W Kirschner
Journal:  Int Rev Cytol       Date:  1983

5.  Quantitative analysis of the effect of Acanthamoeba profilin on actin filament nucleation and elongation.

Authors:  T D Pollard; J A Cooper
Journal:  Biochemistry       Date:  1984-12-18       Impact factor: 3.162

6.  Insertional assembly of actin filament barbed ends in association with formins produces piconewton forces.

Authors:  David R Kovar; Thomas D Pollard
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-17       Impact factor: 11.205

7.  Rate constants for the reactions of ATP- and ADP-actin with the ends of actin filaments.

Authors:  T D Pollard
Journal:  J Cell Biol       Date:  1986-12       Impact factor: 10.539

8.  Mechanism of action of Acanthamoeba profilin: demonstration of actin species specificity and regulation by micromolar concentrations of MgCl2.

Authors:  P C Tseng; T D Pollard
Journal:  J Cell Biol       Date:  1982-07       Impact factor: 10.539

9.  Physical, immunochemical, and functional properties of Acanthamoeba profilin.

Authors:  P C Tseng; M S Runge; J A Cooper; R C Williams; T D Pollard
Journal:  J Cell Biol       Date:  1984-01       Impact factor: 10.539

10.  Purification and characterization of two isoforms of Acanthamoeba profilin.

Authors:  D A Kaiser; M Sato; R F Ebert; T D Pollard
Journal:  J Cell Biol       Date:  1986-01       Impact factor: 10.539

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  89 in total

1.  A systems-biology approach to yeast actin cables.

Authors:  Tyler Drake; Eddy Yusuf; Dimitrios Vavylonis
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

2.  Determinants of Formin Homology 1 (FH1) domain function in actin filament elongation by formins.

Authors:  Naomi Courtemanche; Thomas D Pollard
Journal:  J Biol Chem       Date:  2012-01-14       Impact factor: 5.157

3.  Mutant profilin suppresses mutant actin-dependent mitochondrial phenotype in Saccharomyces cerevisiae.

Authors:  Kuo-Kuang Wen; Melissa McKane; Ema Stokasimov; Peter A Rubenstein
Journal:  J Biol Chem       Date:  2011-09-28       Impact factor: 5.157

4.  Crowding effects on association reactions at membranes.

Authors:  Jun Soo Kim; Arun Yethiraj
Journal:  Biophys J       Date:  2010-03-17       Impact factor: 4.033

5.  Actin polymerization upon processive capping by formin: a model for slowing and acceleration.

Authors:  Tom Shemesh; Michael M Kozlov
Journal:  Biophys J       Date:  2006-12-08       Impact factor: 4.033

6.  Diffusion rate limitations in actin-based propulsion of hard and deformable particles.

Authors:  Richard B Dickinson; Daniel L Purich
Journal:  Biophys J       Date:  2006-05-26       Impact factor: 4.033

7.  Mechanism of actin network attachment to moving membranes: barbed end capture by N-WASP WH2 domains.

Authors:  Carl Co; Derek T Wong; Sarah Gierke; Vicky Chang; Jack Taunton
Journal:  Cell       Date:  2007-03-09       Impact factor: 41.582

8.  Analysis of unregulated formin activity reveals how yeast can balance F-actin assembly between different microfilament-based organizations.

Authors:  Lina Gao; Anthony Bretscher
Journal:  Mol Biol Cell       Date:  2008-01-30       Impact factor: 4.138

9.  Computational modeling highlights the role of the disordered Formin Homology 1 domain in profilin-actin transfer.

Authors:  Brandon G Horan; Gül H Zerze; Young C Kim; Dimitrios Vavylonis; Jeetain Mittal
Journal:  FEBS Lett       Date:  2018-05-24       Impact factor: 4.124

10.  Electrostatic interactions between the Bni1p Formin FH2 domain and actin influence actin filament nucleation.

Authors:  Joseph L Baker; Naomi Courtemanche; Daniel L Parton; Martin McCullagh; Thomas D Pollard; Gregory A Voth
Journal:  Structure       Date:  2014-12-04       Impact factor: 5.006

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