Literature DB >> 1648005

A tester system for detecting each of the six base-pair substitutions in Saccharomyces cerevisiae by selecting for an essential cysteine in iso-1-cytochrome c.

M Hampsey1.   

Abstract

A collection of isogenic yeast strains that is specifically diagnostic for the six possible base-pair substitutions is described. Each strain contains a single, unique base-pair substitution at the Cys-22 codon of the CYC1 gene, which codes for iso-1-cytochrome c. These mutations encode replacements of the functionally critical Cys-22 and render each strain unable to grow on media containing nonfermentable carbon sources (Cyc-). Specific base-pair substitutions, which restore the Cys-22 codon, can be monitored simply by scoring for reversion to the Cyc+ phenotype. These strains revert spontaneously at very low frequencies and exhibit specific patterns of reversion in response to different mutagens. Only true (CYC1+) revertants were recovered after 7 days on selection medium. The following mutagen specificities were observed: ethyl methanesulfonate and N-methyl-N'-nitro-N-nitrosoguanidine, G.C----A.T; 4-nitroquinoline-1-oxide, G.C----T.A and G.C----A.T; diepoxybutane, A.T----T.A, A.T----G.C and G.C----T.A; 5-azacytidine, G.C----C.G. Methyl methanesulfonate induced all six mutations, albeit at relatively low frequencies, with preference for A.T----T.A and A.T----G.C. Ultraviolet light was the most inefficient mutagen used in this study, consistent with its preference for transition mutations at dipyrimidine sequences reported in other systems. This tester system is valuable as a simple and reliable assay for specific mutations without DNA sequence analysis.

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Year:  1991        PMID: 1648005      PMCID: PMC1204453     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  47 in total

1.  mutM, a second mutator locus in Escherichia coli that generates G.C----T.A transversions.

Authors:  M Cabrera; Y Nghiem; J H Miller
Journal:  J Bacteriol       Date:  1988-11       Impact factor: 3.490

2.  Deletions of the iso-1-cytochrome c and adjacent genes of yeast: discovery of the OSM1 gene controlling osmotic sensitivity.

Authors:  A Singh; F Sherman
Journal:  Genetics       Date:  1978-08       Impact factor: 4.562

3.  The base-alteration spectrum of spontaneous and ultraviolet radiation-induced forward mutations in the URA3 locus of Saccharomyces cerevisiae.

Authors:  G S Lee; E A Savage; R G Ritzel; R C von Borstel
Journal:  Mol Gen Genet       Date:  1988-11

4.  Amino acid replacements in yeast iso-1-cytochrome c. Comparison with the phylogenetic series and the tertiary structure of related cytochromes c.

Authors:  D M Hampsey; G Das; F Sherman
Journal:  J Biol Chem       Date:  1986-03-05       Impact factor: 5.157

5.  The yeast rad18 mutator specifically increases G.C----T.A transversions without reducing correction of G-A or C-T mismatches to G.C pairs.

Authors:  B A Kunz; X L Kang; L Kohalmi
Journal:  Mol Cell Biol       Date:  1991-01       Impact factor: 4.272

Review 6.  Yeast iso-1-cytochrome c: genetic analysis of structural requirements.

Authors:  D M Hampsey; G Das; F Sherman
Journal:  FEBS Lett       Date:  1988-04-25       Impact factor: 4.124

7.  Yeast iso-1-cytochrome c. A 2.8 A resolution three-dimensional structure determination.

Authors:  G V Louie; W L Hutcheon; G D Brayer
Journal:  J Mol Biol       Date:  1988-01-20       Impact factor: 5.469

8.  mRNA structures influencing translation in the yeast Saccharomyces cerevisiae.

Authors:  S B Baim; F Sherman
Journal:  Mol Cell Biol       Date:  1988-04       Impact factor: 4.272

9.  DNA sequence analysis of the mutational specificity of u.v. light in the SUP4-o gene of yeast.

Authors:  B A Kunz; M K Pierce; J R Mis; C N Giroux
Journal:  Mutagenesis       Date:  1987-11       Impact factor: 3.000

10.  The mutY gene: a mutator locus in Escherichia coli that generates G.C----T.A transversions.

Authors:  Y Nghiem; M Cabrera; C G Cupples; J H Miller
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

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  12 in total

1.  The role of mismatch repair in the prevention of base pair mutations in Saccharomyces cerevisiae.

Authors:  M C Earley; G F Crouse
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

2.  A new reversion assay for measuring all possible base pair substitutions in Saccharomyces cerevisiae.

Authors:  Teresa-Marie Williams; Rebecca M Fabbri; Jason W Reeves; Gray F Crouse
Journal:  Genetics       Date:  2005-05-23       Impact factor: 4.562

3.  Mutations in the RNA polymerase II transcription machinery suppress the hyperrecombination mutant hpr1 delta of Saccharomyces cerevisiae.

Authors:  H Y Fan; K K Cheng; H L Klein
Journal:  Genetics       Date:  1996-03       Impact factor: 4.562

4.  Detection and classification of mutagens: a set of base-specific Salmonella tester strains.

Authors:  P Gee; D M Maron; B N Ames
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

5.  Isolation and characterization of SUA5, a novel gene required for normal growth in Saccharomyces cerevisiae.

Authors:  J G Na; I Pinto; M Hampsey
Journal:  Genetics       Date:  1992-08       Impact factor: 4.562

6.  ChrR positively regulates transcription of the Rhodobacter sphaeroides cytochrome c2 gene.

Authors:  B A Schilke; T J Donohue
Journal:  J Bacteriol       Date:  1995-04       Impact factor: 3.490

7.  The sua8 suppressors of Saccharomyces cerevisiae encode replacements of conserved residues within the largest subunit of RNA polymerase II and affect transcription start site selection similarly to sua7 (TFIIB) mutations.

Authors:  R W Berroteran; D E Ware; M Hampsey
Journal:  Mol Cell Biol       Date:  1994-01       Impact factor: 4.272

8.  Extragenic suppressors of Schizosaccharomyces pombe rad9 mutations uncouple radioresistance and hydroxyurea sensitivity from cell cycle checkpoint control.

Authors:  H B Lieberman
Journal:  Genetics       Date:  1995-09       Impact factor: 4.562

9.  Mutational analysis of the Prt1 protein subunit of yeast translation initiation factor 3.

Authors:  D R Evans; C Rasmussen; P J Hanic-Joyce; G C Johnston; R A Singer; C A Barnes
Journal:  Mol Cell Biol       Date:  1995-08       Impact factor: 4.272

10.  Detection of genomic deletions in rice using oligonucleotide microarrays.

Authors:  Myron Bruce; Ann Hess; Jianfa Bai; Ramil Mauleon; M Genaleen Diaz; Nobuko Sugiyama; Alicia Bordeos; Guo-Liang Wang; Hei Leung; Jan E Leach
Journal:  BMC Genomics       Date:  2009-03-25       Impact factor: 3.969

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