Literature DB >> 16463189

A mathematical investigation of a Clock and Wavefront model for somitogenesis.

R E Baker1, S Schnell, P K Maini.   

Abstract

Somites are transient blocks of cells that form sequentially along the antero-posterior axis of vertebrate embryos. They give rise to the vertebrae, ribs and other associated features of the trunk. In this work we develop and analyse a mathematical formulation of a version of the Clock and Wavefront model for somite formation, where the clock controls when the boundaries of the somites form and the wavefront determines where they form. Our analysis indicates that this interaction between a segmentation clock and a wavefront can explain the periodic pattern of somites observed in normal embryos. We can also show that a simplification of the model provides a mechanism for predicting the anomalies resulting from perturbation of the wavefront.

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Year:  2006        PMID: 16463189     DOI: 10.1007/s00285-005-0362-2

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.164


  20 in total

1.  A cell cycle model for somitogenesis: mathematical formulation and numerical simulation.

Authors:  J R Collier; D Mcinerney; S Schnell; P K Maini; D J Gavaghan; P Houston; C D Stern
Journal:  J Theor Biol       Date:  2000-12-07       Impact factor: 2.691

Review 2.  Molecular and cellular biology of avian somite development.

Authors:  F E Stockdale; W Nikovits; B Christ
Journal:  Dev Dyn       Date:  2000-11       Impact factor: 3.780

3.  Developmental biology: clocks and hox.

Authors:  C J Tabin; R L Johnson
Journal:  Nature       Date:  2001-08-23       Impact factor: 49.962

Review 4.  Models for pattern formation in somitogenesis: a marriage of cellular and molecular biology.

Authors:  Santiago Schnell; Philip K Maini; Daragh McInerney; David J Gavaghan; Paul Houston
Journal:  C R Biol       Date:  2002-03       Impact factor: 1.583

Review 5.  The segmentation clock: converting embryonic time into spatial pattern.

Authors:  Olivier Pourquié
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

Review 6.  Somitogenesis.

Authors:  A Gossler; M Hrabĕ de Angelis
Journal:  Curr Top Dev Biol       Date:  1998       Impact factor: 4.897

7.  A clock and wavefront model for control of the number of repeated structures during animal morphogenesis.

Authors:  J Cooke; E C Zeeman
Journal:  J Theor Biol       Date:  1976-05-21       Impact factor: 2.691

8.  FGF signaling controls somite boundary position and regulates segmentation clock control of spatiotemporal Hox gene activation.

Authors:  J Dubrulle; M J McGrew; O Pourquié
Journal:  Cell       Date:  2001-07-27       Impact factor: 41.582

9.  Periodic segmental anomalies induced by heat shock in the chick embryo are associated with the cell cycle.

Authors:  D R Primmett; W E Norris; G J Carlson; R J Keynes; C D Stern
Journal:  Development       Date:  1989-01       Impact factor: 6.868

10.  A cell lineage analysis of segmentation in the chick embryo.

Authors:  C D Stern; S E Fraser; R J Keynes; D R Primmett
Journal:  Development       Date:  1988       Impact factor: 6.868

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  10 in total

Review 1.  Mathematical models for somite formation.

Authors:  Ruth E Baker; Santiago Schnell; Philip K Maini
Journal:  Curr Top Dev Biol       Date:  2008       Impact factor: 4.897

Review 2.  From segment to somite: segmentation to epithelialization analyzed within quantitative frameworks.

Authors:  Paul M Kulesa; Santiago Schnell; Stefan Rudloff; Ruth E Baker; Philip K Maini
Journal:  Dev Dyn       Date:  2007-06       Impact factor: 3.780

3.  A delay stochastic process with applications in molecular biology.

Authors:  Robert Schlicht; Gerhard Winkler
Journal:  J Math Biol       Date:  2008-05-01       Impact factor: 2.259

4.  Synchronized oscillation of the segmentation clock gene in vertebrate development.

Authors:  Koichiro Uriu; Yoshihiro Morishita; Yoh Iwasa
Journal:  J Math Biol       Date:  2009-09-16       Impact factor: 2.259

5.  Random cell movement promotes synchronization of the segmentation clock.

Authors:  Koichiro Uriu; Yoshihiro Morishita; Yoh Iwasa
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-01       Impact factor: 11.205

6.  The kinetics in mathematical models on segmentation clock genes in zebrafish.

Authors:  Kuan-Wei Chen; Kang-Ling Liao; Chih-Wen Shih
Journal:  J Math Biol       Date:  2017-05-25       Impact factor: 2.259

Review 7.  A multi-cell, multi-scale model of vertebrate segmentation and somite formation.

Authors:  Susan D Hester; Julio M Belmonte; J Scott Gens; Sherry G Clendenon; James A Glazier
Journal:  PLoS Comput Biol       Date:  2011-10-06       Impact factor: 4.475

Review 8.  Waves and patterning in developmental biology: vertebrate segmentation and feather bud formation as case studies.

Authors:  Ruth E Baker; Santiago Schnell; Philip K Maini
Journal:  Int J Dev Biol       Date:  2009       Impact factor: 2.203

9.  Sequential pattern formation governed by signaling gradients.

Authors:  David J Jörg; Andrew C Oates; Frank Jülicher
Journal:  Phys Biol       Date:  2016-10-11       Impact factor: 2.583

Review 10.  Progress and perspective of TBX6 gene in congenital vertebral malformations.

Authors:  Weisheng Chen; Jiaqi Liu; Dongtang Yuan; Yuzhi Zuo; Zhenlei Liu; Sen Liu; Qiankun Zhu; Guixing Qiu; Shishu Huang; Philip F Giampietro; Feng Zhang; Nan Wu; Zhihong Wu
Journal:  Oncotarget       Date:  2016-08-30
  10 in total

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