Literature DB >> 16461647

Biodegradation of 3-nitrotyrosine by Burkholderia sp. strain JS165 and Variovorax paradoxus JS171.

Shirley F Nishino1, Jim C Spain.   

Abstract

The cascade of reactive nitrogen species generated from nitric oxide causes modification of proteins, lipids, and nucleic acids in a wide range of organisms. 3-Nitrotyrosine is one of the most common products of the action of reactive nitrogen species on proteins. Although a great deal is known about the formation of 3-nitrotyrosine, the subsequent metabolism of this compound is a mystery. Variovorax paradoxus JS171 and Burkholderia sp. strain JS165 were isolated from soil slurries when 3-nitrotyrosine was provided as the sole carbon, nitrogen, and energy source. During growth on 3-nitrotyrosine stoichiometric amounts of nitrite were released along with approximately one-half of the theoretically available ammonia. The catabolic pathway involving oxidative denitration is distinct from the pathway for tyrosine metabolism. The facile isolation and the specific, regulated pathway for 3-nitrotyrosine degradation in natural ecosystems suggest that there is a significant flux of 3-nitrotyrosine in such environments.

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Year:  2006        PMID: 16461647      PMCID: PMC1392975          DOI: 10.1128/AEM.72.2.1040-1044.2006

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  29 in total

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Authors:  U Arunachalam; V Massey; C S Vaidyanathan
Journal:  J Biol Chem       Date:  1992-12-25       Impact factor: 5.157

2.  METABOLISM OF P-HYDROXYPHENYLACETIC ACID IN PSEUDOMONAS OVALIS.

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Journal:  Biochim Biophys Acta       Date:  1964-12-09

3.  Purification studies of tyrosine-alpha-ketoglutaric acid transaminase.

Authors:  Z N CANELLAKIS; P P COHEN
Journal:  J Biol Chem       Date:  1956-09       Impact factor: 5.157

4.  Purification and characterization of a bacterial nitrophenol oxygenase which converts ortho-nitrophenol to catechol and nitrite.

Authors:  J Zeyer; H P Kocher
Journal:  J Bacteriol       Date:  1988-04       Impact factor: 3.490

5.  In vivo disposition of 3-nitro-L-tyrosine in rats: implications on tracking systemic peroxynitrite exposure.

Authors:  M A Tabrizi-Fard; T S Maurer; H L Fung
Journal:  Drug Metab Dispos       Date:  1999-04       Impact factor: 3.922

Review 6.  The moving frontier in nitric oxide-dependent signaling.

Authors:  Carl Nathan
Journal:  Sci STKE       Date:  2004-11-02

7.  The mechanism-based inactivation of 2,3-dihydroxybiphenyl 1,2-dioxygenase by catecholic substrates.

Authors:  Frederic H Vaillancourt; Genevieve Labbe; Nathalie M Drouin; Pascal D Fortin; Lindsay D Eltis
Journal:  J Biol Chem       Date:  2001-11-13       Impact factor: 5.157

8.  Purification and properties of homoprotocatechuate 2,3-dioxygenase from Bacillus stearothermophilus.

Authors:  M P Jamaluddin
Journal:  J Bacteriol       Date:  1977-02       Impact factor: 3.490

9.  The homogentisate pathway: a central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida.

Authors:  Elsa Arias-Barrau; Elías R Olivera; José M Luengo; Cristina Fernández; Beatriz Galán; José L García; Eduardo Díaz; Baltasar Miñambres
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

10.  Sample pretreatment with nitrate reductase and glucose-6-phosphate dehydrogenase quantitatively reduces nitrate while avoiding interference by NADP+ when the Griess reaction is used to assay for nitrite.

Authors:  C P Verdon; B A Burton; R L Prior
Journal:  Anal Biochem       Date:  1995-01-20       Impact factor: 3.365

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  13 in total

Review 1.  Nitroaromatic compounds, from synthesis to biodegradation.

Authors:  Kou-San Ju; Rebecca E Parales
Journal:  Microbiol Mol Biol Rev       Date:  2010-06       Impact factor: 11.056

2.  Complete genome sequence of the metabolically versatile plant growth-promoting endophyte Variovorax paradoxus S110.

Authors:  Jong-In Han; Hong-Kyu Choi; Seung-Won Lee; Paul M Orwin; Jina Kim; Sarah L Laroe; Tae-Gyu Kim; Jennifer O'Neil; Jared R Leadbetter; Sang Yup Lee; Cheol-Goo Hur; Jim C Spain; Galina Ovchinnikova; Lynne Goodwin; Cliff Han
Journal:  J Bacteriol       Date:  2010-12-23       Impact factor: 3.490

3.  Isolation of bacteria capable of growth with 2-methylisoborneol and geosmin as the sole carbon and energy sources.

Authors:  Lior Guttman; Jaap van Rijn
Journal:  Appl Environ Microbiol       Date:  2011-11-11       Impact factor: 4.792

4.  Biodegradation of 5-nitroanthranilic acid by Bradyrhizobium sp. strain JS329.

Authors:  Yi Qu; Jim C Spain
Journal:  Appl Environ Microbiol       Date:  2010-01-15       Impact factor: 4.792

5.  Escherichia coli NsrR regulates a pathway for the oxidation of 3-nitrotyramine to 4-hydroxy-3-nitrophenylacetate.

Authors:  Linda D Rankin; Diane M Bodenmiller; Jonathan D Partridge; Shirley F Nishino; Jim C Spain; Stephen Spiro
Journal:  J Bacteriol       Date:  2008-07-25       Impact factor: 3.490

Review 6.  Quorum quenching revisited--from signal decays to signalling confusion.

Authors:  Kar-Wai Hong; Chong-Lek Koh; Choon-Kook Sam; Wai-Fong Yin; Kok-Gan Chan
Journal:  Sensors (Basel)       Date:  2012-04-10       Impact factor: 3.576

7.  Genes that influence swarming motility and biofilm formation in Variovorax paradoxus EPS.

Authors:  Michael J Pehl; William David Jamieson; Karen Kong; Jessica L Forbester; Richard J Fredendall; Glenn A Gregory; Jacob E McFarland; Jessica M Healy; Paul M Orwin
Journal:  PLoS One       Date:  2012-02-21       Impact factor: 3.240

8.  Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax paradoxus Strain EPS.

Authors:  Jong-In Han; Jim C Spain; Jared R Leadbetter; Galina Ovchinnikova; Lynne A Goodwin; Cliff S Han; Tanja Woyke; Karen W Davenport; Paul M Orwin
Journal:  Genome Announc       Date:  2013-10-24

9.  Coordinated surface activities in Variovorax paradoxus EPS.

Authors:  W David Jamieson; Michael J Pehl; Glenn A Gregory; Paul M Orwin
Journal:  BMC Microbiol       Date:  2009-06-12       Impact factor: 3.605

10.  Biodegradation of the allelopathic chemical m-tyrosine by Bacillus aquimaris SSC5 involves the homogentisate central pathway.

Authors:  Fazlurrahman Khan; Munesh Kumari; Swaranjit Singh Cameotra
Journal:  PLoS One       Date:  2013-10-01       Impact factor: 3.240

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