Literature DB >> 16453731

The sequence of carnation etched ring virus DNA: comparison with cauliflower mosaic virus and retroviruses.

R Hull1, J Sadler, M Longstaff.   

Abstract

Carnation etched ring virus (CERV) DNA comprises 7932 bp. CERV primer binding sites and overall genome organization are similar to those of the related cauliflower mosaic virus (CaMV). The six open reading frames of CERV showed amino acid homology (50-80%) with CaMV ORFs I-VI; no homologues of CaMV ORFs VII or VIII were found. CERV ORFs 1-5 interface each other with the sequence ATGA. The comparison of CERV ORF5 with CaMV ORFV highlighted regions which show homologies to retrovirus gag/pol protease, RNase H and DNA polymerase domains; the possibility that the DNA polymerase domain comprises two subdomains, operating off different templates, is discussed. Both CERV and CaMV ORFs I have sequence homology to tobacco mosaic virus P30 and plastocyanin.

Entities:  

Year:  1986        PMID： 16453731      PMCID： PMC1167297          DOI： 10.1002/j.1460-2075.1986.tb04614.x

Source DB:  PubMed          Journal:  EMBO J        ISSN： 0261-4189            Impact factor:   11.598


  45 in total

1.  Plasmid pKC7: a vector containing ten restriction endonuclease sites suitable for cloning DNA segments.

Authors:  R N Rao; S G Rogers
Journal:  Gene       Date:  1979-09       Impact factor: 3.688

2.  Biochemical properties of p15-associated protease in an avian RNA tumor virus.

Authors:  K J Dittmar; K Moelling
Journal:  J Virol       Date:  1978-10       Impact factor: 5.103

3.  Expression of the Rous sarcoma virus pol gene by ribosomal frameshifting.

Authors:  T Jacks; H E Varmus
Journal:  Science       Date:  1985-12-13       Impact factor: 47.728

4.  Compilation and analysis of sequences upstream from the translational start site in eukaryotic mRNAs.

Authors:  M Kozak
Journal:  Nucleic Acids Res       Date:  1984-01-25       Impact factor: 16.971

5.  The nucleotide sequences of the initiator transfer RNAs from bean cytoplasm and chloroplasts.

Authors:  J Canaday; P Guillemaut; J H Weil
Journal:  Nucleic Acids Res       Date:  1980-03-11       Impact factor: 16.971

6.  Complete amino acid sequence of the basic nucleic acid binding protein of feline leukemia virus.

Authors:  T D Copeland; M A Morgan; S Oroszlan
Journal:  Virology       Date:  1984-02       Impact factor: 3.616

7.  Transcription of Cauliflower mosaic virus DNA: detection of promoter sequences, and characterization of transcripts.

Authors:  H Guilley; R K Dudley; G Jonard; E Balàzs; K E Richards
Journal:  Cell       Date:  1982-10       Impact factor: 41.582

8.  The complete nucleotide sequence of an infectious clone of cauliflower mosaic virus by M13mp7 shotgun sequencing.

Authors:  R C Gardner; A J Howarth; P Hahn; M Brown-Luedi; R J Shepherd; J Messing
Journal:  Nucleic Acids Res       Date:  1981-06-25       Impact factor: 16.971

9.  The organisation and interviral homologies of genes at the 3' end of tobacco rattle virus RNA1.

Authors:  M Boccara; W D Hamilton; D C Baulcombe
Journal:  EMBO J       Date:  1986-02       Impact factor: 11.598

10.  Close structural resemblance between putative polymerase of a Drosophila transposable genetic element 17.6 and pol gene product of Moloney murine leukaemia virus.

Authors:  H Toh; R Kikuno; H Hayashida; T Miyata; W Kugimiya; S Inouye; S Yuki; K Saigo
Journal:  EMBO J       Date:  1985-05       Impact factor: 11.598
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  47 in total

1.  A redefinition of the Asp-Asp domain of reverse transcriptases.

Authors:  A M Velasco; L Medrano; A Lazcano; J Oró
Journal:  J Mol Evol       Date:  1992-12       Impact factor: 2.395

2.  The figwort mosaic virus gene VI promoter region contains a sequence highly homologous to the octopine synthase (ocs) enhancer element.

Authors:  R Cooke
Journal:  Plant Mol Biol       Date:  1990-07       Impact factor: 4.076

3.  Properties of Commelina yellow mottle virus's complete DNA sequence, genomic discontinuities and transcript suggest that it is a pararetrovirus.

Authors:  S L Medberry; B E Lockhart; N E Olszewski
Journal:  Nucleic Acids Res       Date:  1990-09-25       Impact factor: 16.971

4.  Retroviral-like element in a marine invertebrate.

Authors:  M S Springer; E H Davidson; R J Britten
Journal:  Proc Natl Acad Sci U S A       Date:  1991-10-01       Impact factor: 11.205

5.  An unusually compact retrotransposon in maize.

Authors:  M A Johns; M S Babcock; S M Fuerstenberg; S I Fuerstenberg; M Freeling; R B Simpson
Journal:  Plant Mol Biol       Date:  1989-06       Impact factor: 4.076

6.  Gene I, a potential cell-to-cell movement locus of cauliflower mosaic virus, encodes an RNA-binding protein.

Authors:  V Citovsky; D Knorr; P Zambryski
Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-15       Impact factor: 11.205

7.  Gene I mutants of peanut chlorotic streak virus, a caulimovirus, replicate in plants but do not move from cell to cell.

Authors:  D A Ducasse; A R Mushegian; R J Shepherd
Journal:  J Virol       Date:  1995-09       Impact factor: 5.103

8.  Identification of structural domains within the cauliflower mosaic virus movement protein by scanning deletion mutagenesis and epitope tagging.

Authors:  C L Thomas; A J Maule
Journal:  Plant Cell       Date:  1995-05       Impact factor: 11.277

9.  Phylogenetic relationships reveal recombination among isolates of cauliflower mosaic virus.

Authors:  K D Chenault; U Melcher
Journal:  J Mol Evol       Date:  1994-11       Impact factor: 2.395

10.  Sterol C-24 methyltransferase type 1 controls the flux of carbon into sterol biosynthesis in tobacco seed.

Authors:  Niklas Holmberg; Mark Harker; Carl L Gibbard; Andrew D Wallace; John C Clayton; Sally Rawlins; Amanda Hellyer; Richard Safford
Journal:  Plant Physiol       Date:  2002-09       Impact factor: 8.340
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