Literature DB >> 6927842

The nucleotide sequences of the initiator transfer RNAs from bean cytoplasm and chloroplasts.

J Canaday, P Guillemaut, J H Weil.   

Abstract

The initiator tRNAsMet from the cytoplasm and chloroplasts of Phaseolus vulgaris have been purified and sequenced. The sequence of bean cytoplasmic initiator tRNAiMet is : pA-U-C-A-G-A-G-U-m1G-m2G-C-G-C-A-G-C-G-G-A-A-G-C-G-U-m2G-G-U-G-G-G2-C-C-C-A-U-t6A-A-C-C-C-A-C-A-G-m7G-D-m5C-C-C-A-G-G-A-psi-C-G-m1A-A-A-C-C-U-Gm-G-C-U-C-U-G-A-U-A-C-C-AOH. The sequence of bean cytoplasmic tRNAiMet is almost identical to that of wheat germ and shows a high degree of homology with other cytoplasmic initiator tRNAs. The sequence of bean chloroplast initiator tRNAfMet is : pC-G-C-G-G-A-G-U-A-G-A-G-C-A-A-C-U-U-Gm-G-D-A-G-C-U-C-G-C-A-A-G-G-C-U-C-A-U-A-A-C-C-U-U-G-A-A-m7G-acp3U-U-A-C-G-G-G-T-psi-C-A-A-A-U-C-C-C-G-U-C-U-C-C-G-C-A-A- C-C-AOH. Bean chloroplast initiator tRNAfMet sequence shows procaryotic characteristics at the 5' end of the acceptor stem and in the TpsiC loop, but also contains some distinctive features.

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Year:  1980        PMID: 6927842      PMCID: PMC323968          DOI: 10.1093/nar/8.5.999

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

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Authors:  G Burkard; B Eclancher; J H. Weil
Journal:  FEBS Lett       Date:  1969-08       Impact factor: 4.124

2.  The use of nuclease P1 in sequence analysis of end group labeled RNA.

Authors:  M Silberklang; A M Gillum; U L RajBhandary
Journal:  Nucleic Acids Res       Date:  1977-12       Impact factor: 16.971

3.  Sequence analysis of 5'[32P] labeled mRNA and tRNA using polyacrylamide gel electrophoresis.

Authors:  R E Lockard; B Alzner-Deweerd; J E Heckman; J MacGee; M W Tabor; U L RajBhandary
Journal:  Nucleic Acids Res       Date:  1978-01       Impact factor: 16.971

4.  Nucleotide sequence of starfish initiator tRNA.

Authors:  Y Kuchino; M Kato; H Sugisaki; S Nishimura
Journal:  Nucleic Acids Res       Date:  1979-08-10       Impact factor: 16.971

5.  Formylation of mischarged E. coli tRNA Met f .

Authors:  R Giegé; J P Ebel; B F Clark
Journal:  FEBS Lett       Date:  1973-03-15       Impact factor: 4.124

6.  The first nucleotide sequence of an organelle transfer RNA: chloroplastic tRNAphe.

Authors:  S H Chang; C K Brum; M Siberklang; U L RajBhandary; L I Hecker; W E Barnett
Journal:  Cell       Date:  1976-12       Impact factor: 41.582

7.  Studies on the sequence of the 3'-terminal region of turnip-yellow-mosaic-virus RNA.

Authors:  M Silberklang; A Prochiantz; A L Haenni; U L Rajbhandary
Journal:  Eur J Biochem       Date:  1977-02

8.  Evidence against the folate-mediated formylation of formyl-accepting methionyl transfer ribonucleic acid in Streptococcus faecalis R.

Authors:  C E Samuel; L D'Ari; J C Rabinowitz
Journal:  J Biol Chem       Date:  1970-10-10       Impact factor: 5.157

9.  Studies on human tRNA. I. The rapid, large scale isolation and partial fractionation of placenta and liver tRNA.

Authors:  B A Roe
Journal:  Nucleic Acids Res       Date:  1975-01       Impact factor: 16.971

10.  The primary structure of cytoplasmic initiator transfer ribonucleic acid from Torulopsis utilis.

Authors:  S Yamashiro-Matsumura; S Takemura
Journal:  J Biochem       Date:  1979-08       Impact factor: 3.387

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  24 in total

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Authors:  G Keith; A L Glasser; J Desgrès; K C Kuo; C W Gehrke
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

2.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; N Dank; S Nock; A Schön
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

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Authors:  M A Johns; M S Babcock; S M Fuerstenberg; S I Fuerstenberg; M Freeling; R B Simpson
Journal:  Plant Mol Biol       Date:  1989-06       Impact factor: 4.076

4.  Isolation and sequence analysis of a nuclear tRNA(met-i) gene from soybean.

Authors:  J M Palmer; W R Folk
Journal:  Plant Mol Biol       Date:  1987-01       Impact factor: 4.076

5.  A copia-like element in Pisum demonstrates the uses of dispersed repeated sequences in genetic analysis.

Authors:  D L Lee; T H Ellis; L Turner; R P Hellens; W G Cleary
Journal:  Plant Mol Biol       Date:  1990-11       Impact factor: 4.076

6.  Nucleotide sequence of Citrus limon 26S rRNA gene and secondary structure model of its RNA.

Authors:  V O Kolosha; I Fodor
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7.  A copia-like retrotransposon Tgmr closely linked to the Rps1-k allele that confers race-specific resistance of soybean to Phytophthora sojae.

Authors:  M K Bhattacharyya; R A Gonzales; M Kraft; R I Buzzell
Journal:  Plant Mol Biol       Date:  1997-05       Impact factor: 4.076

8.  Nucleotide sequence of a methionine initiator tRNA gene of Arabidopsis thaliana.

Authors:  K Akama; S Tanifuji
Journal:  Plant Mol Biol       Date:  1989-11       Impact factor: 4.076

9.  The nucleotide sequence of spinach chloroplast tryptophan transfer RNA.

Authors:  J Canaday; P Guillemaut; R Gloeckler; J H Weil
Journal:  Nucleic Acids Res       Date:  1981-01-10       Impact factor: 16.971

10.  Sequence of figwort mosaic virus DNA (caulimovirus group).

Authors:  R D Richins; H B Scholthof; R J Shepherd
Journal:  Nucleic Acids Res       Date:  1987-10-26       Impact factor: 16.971

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