Literature DB >> 14769932

Replication of plant RNA virus genomes in a cell-free extract of evacuolated plant protoplasts.

Keisuke Komoda1, Satoshi Naito, Masayuki Ishikawa.   

Abstract

The replication of eukaryotic positive-strand RNA virus genomes occurs through a complex process involving multiple viral and host proteins and intracellular membranes. Here we report a cell-free system that reproduces this process in vitro. This system uses a membrane-containing extract of uninfected plant protoplasts from which the vacuoles had been removed by Percoll gradient centrifugation. We demonstrate that the system supported translation, negative-strand RNA synthesis, genomic RNA replication, and subgenomic RNA transcription of tomato mosaic virus and two other plant positive-strand RNA viruses. The RNA synthesis, which depended on translation of the genomic RNA, produced virus-related RNA species similar to those that are generated in vivo. This system will aid in the elucidation of the mechanisms of genome replication in these viruses.

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Year:  2004        PMID: 14769932      PMCID: PMC357018          DOI: 10.1073/pnas.0307131101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  RECONSTITUTION OF ACTIVE TOBACCO MOSAIC VIRUS FROM ITS INACTIVE PROTEIN AND NUCLEIC ACID COMPONENTS.

Authors:  H Fraenkel-Conrat; R C Williams
Journal:  Proc Natl Acad Sci U S A       Date:  1955-10-15       Impact factor: 11.205

2.  Cell-free, de novo synthesis of poliovirus.

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Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

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Journal:  Nature       Date:  1970-11-07       Impact factor: 49.962

4.  The use of intensifying screens or organic scintillators for visualizing radioactive molecules resolved by gel electrophoresis.

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Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

5.  A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids.

Authors:  Michael Schwartz; Jianbo Chen; Michael Janda; Michael Sullivan; Johan den Boon; Paul Ahlquist
Journal:  Mol Cell       Date:  2002-03       Impact factor: 17.970

6.  S-adenosyl-L-methionine is an effector in the posttranscriptional autoregulation of the cystathionine gamma-synthase gene in Arabidopsis.

Authors:  Yukako Chiba; Ryoko Sakurai; Michiko Yoshino; Kimihiro Ominato; Mari Ishikawa; Hitoshi Onouchi; Satoshi Naito
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-21       Impact factor: 11.205

7.  Structure and assembly of turnip crinkle virus. II. Mechanism of reassembly in vitro.

Authors:  P K Sorger; P G Stockley; S C Harrison
Journal:  J Mol Biol       Date:  1986-10-20       Impact factor: 5.469

8.  UAG readthrough during TMV RNA translation: isolation and sequence of two tRNAs with suppressor activity from tobacco plants.

Authors:  H Beier; M Barciszewska; G Krupp; R Mitnacht; H J Gross
Journal:  EMBO J       Date:  1984-02       Impact factor: 11.598

Review 9.  Comparison of the replication of positive-stranded RNA viruses of plants and animals.

Authors:  K W Buck
Journal:  Adv Virus Res       Date:  1996       Impact factor: 9.937

Review 10.  Regulation of tobamovirus gene expression.

Authors:  W O Dawson; K M Lehto
Journal:  Adv Virus Res       Date:  1990       Impact factor: 9.937

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  53 in total

1.  Poly(A)-binding protein facilitates translation of an uncapped/nonpolyadenylated viral RNA by binding to the 3' untranslated region.

Authors:  Hiro-Oki Iwakawa; Yuri Tajima; Takako Taniguchi; Masanori Kaido; Kazuyuki Mise; Yukihide Tomari; Hisaaki Taniguchi; Tetsuro Okuno
Journal:  J Virol       Date:  2012-05-16       Impact factor: 5.103

Review 2.  Plant viruses. Invaders of cells and pirates of cellular pathways.

Authors:  Richard S Nelson; Vitaly Citovsky
Journal:  Plant Physiol       Date:  2005-08       Impact factor: 8.340

3.  Harnessing host ROS-generating machinery for the robust genome replication of a plant RNA virus.

Authors:  Kiwamu Hyodo; Kenji Hashimoto; Kazuyuki Kuchitsu; Nobuhiro Suzuki; Tetsuro Okuno
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-01       Impact factor: 11.205

4.  The resistance protein Tm-1 inhibits formation of a Tomato mosaic virus replication protein-host membrane protein complex.

Authors:  Kazuhiro Ishibashi; Masayuki Ishikawa
Journal:  J Virol       Date:  2013-05-08       Impact factor: 5.103

5.  A Suppressor Screen for AGO1 Degradation by the Viral F-Box P0 Protein Uncovers a Role for AGO DUF1785 in sRNA Duplex Unwinding.

Authors:  Benoît Derrien; Marion Clavel; Nicolas Baumberger; Taichiro Iki; Alexis Sarazin; Thibaut Hacquard; María Rosa Ponce; Véronique Ziegler-Graff; Hervé Vaucheret; José Luis Micol; Olivier Voinnet; Pascal Genschik
Journal:  Plant Cell       Date:  2018-05-30       Impact factor: 11.277

6.  Membrane-bound tomato mosaic virus replication proteins participate in RNA synthesis and are associated with host proteins in a pattern distinct from those that are not membrane bound.

Authors:  Masaki Nishikiori; Koji Dohi; Masashi Mori; Tetsuo Meshi; Satoshi Naito; Masayuki Ishikawa
Journal:  J Virol       Date:  2006-09       Impact factor: 5.103

7.  The Plant Noncanonical Antiviral Resistance Protein JAX1 Inhibits Potexviral Replication by Targeting the Viral RNA-Dependent RNA Polymerase.

Authors:  Tetsuya Yoshida; Takuya Shiraishi; Yuka Hagiwara-Komoda; Ken Komatsu; Kensaku Maejima; Yukari Okano; Yuji Fujimoto; Akira Yusa; Yasuyuki Yamaji; Shigetou Namba
Journal:  J Virol       Date:  2019-01-17       Impact factor: 5.103

8.  ADP ribosylation factor 1 plays an essential role in the replication of a plant RNA virus.

Authors:  Kiwamu Hyodo; Akira Mine; Takako Taniguchi; Masanori Kaido; Kazuyuki Mise; Hisaaki Taniguchi; Tetsuro Okuno
Journal:  J Virol       Date:  2012-10-24       Impact factor: 5.103

9.  Quantitative and qualitative involvement of P3N-PIPO in overcoming recessive resistance against Clover yellow vein virus in pea carrying the cyv1 gene.

Authors:  Sun Hee Choi; Yuka Hagiwara-Komoda; Kenji S Nakahara; Go Atsumi; Ryoko Shimada; Yusuke Hisa; Satoshi Naito; Ichiro Uyeda
Journal:  J Virol       Date:  2013-04-24       Impact factor: 5.103

10.  A viral noncoding RNA generated by cis-element-mediated protection against 5'->3' RNA decay represses both cap-independent and cap-dependent translation.

Authors:  Hiro-Oki Iwakawa; Hiroyuki Mizumoto; Hideaki Nagano; Yuka Imoto; Kazuma Takigawa; Siriruk Sarawaneeyaruk; Masanori Kaido; Kazuyuki Mise; Tetsuro Okuno
Journal:  J Virol       Date:  2008-08-13       Impact factor: 5.103

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