Literature DB >> 16452979

Functional genomics reveals genes involved in protein secretion and Golgi organization.

Frederic Bard1, Laetitia Casano, Arrate Mallabiabarrena, Erin Wallace, Kota Saito, Hitoshi Kitayama, Gianni Guizzunti, Yue Hu, Franz Wendler, Ramanuj Dasgupta, Norbert Perrimon, Vivek Malhotra.   

Abstract

Yeast genetics and in vitro biochemical analysis have identified numerous genes involved in protein secretion. As compared with yeast, however, the metazoan secretory pathway is more complex and many mechanisms that regulate organization of the Golgi apparatus remain poorly characterized. We performed a genome-wide RNA-mediated interference screen in a Drosophila cell line to identify genes required for constitutive protein secretion. We then classified the genes on the basis of the effect of their depletion on organization of the Golgi membranes. Here we show that depletion of class A genes redistributes Golgi membranes into the endoplasmic reticulum, depletion of class B genes leads to Golgi fragmentation, depletion of class C genes leads to aggregation of Golgi membranes, and depletion of class D genes causes no obvious change. Of the 20 new gene products characterized so far, several localize to the Golgi membranes and the endoplasmic reticulum.

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Year:  2006        PMID: 16452979     DOI: 10.1038/nature04377

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  173 in total

1.  Genome-wide RNAi screening identifies human proteins with a regulatory function in the early secretory pathway.

Authors:  Jeremy C Simpson; Brigitte Joggerst; Vibor Laketa; Fatima Verissimo; Cihan Cetin; Holger Erfle; Mariana G Bexiga; Vasanth R Singan; Jean-Karim Hériché; Beate Neumann; Alvaro Mateos; Jonathon Blake; Stephanie Bechtel; Vladimir Benes; Stefan Wiemann; Jan Ellenberg; Rainer Pepperkok
Journal:  Nat Cell Biol       Date:  2012-06-03       Impact factor: 28.824

2.  Synchronization of secretory protein traffic in populations of cells.

Authors:  Gaelle Boncompain; Severine Divoux; Nelly Gareil; Helene de Forges; Aurianne Lescure; Lynda Latreche; Valentina Mercanti; Florence Jollivet; Graça Raposo; Franck Perez
Journal:  Nat Methods       Date:  2012-03-11       Impact factor: 28.547

3.  Class II ADP-ribosylation factors are required for efficient secretion of dengue viruses.

Authors:  Mateusz Kudelko; Jean-Baptiste Brault; Kevin Kwok; Ming Yuan Li; Nathalie Pardigon; J S Malik Peiris; Roberto Bruzzone; Philippe Desprès; Béatrice Nal; Pei Gang Wang
Journal:  J Biol Chem       Date:  2011-11-21       Impact factor: 5.157

4.  SNARE proteins are not excessive for the formation of post-Golgi SNARE complexes in HeLa cells.

Authors:  Miki Okayama; Akiko Shitara; Toshiya Arakawa; Yoshifumi Tajima; Itaru Mizoguchi; Taishin Takuma
Journal:  Mol Cell Biochem       Date:  2012-04-03       Impact factor: 3.396

5.  Dissecting the biological role of mucin-type O-glycosylation using RNA interference in Drosophila cell culture.

Authors:  Liping Zhang; Kelly G Ten Hagen
Journal:  J Biol Chem       Date:  2010-08-31       Impact factor: 5.157

6.  Regulation of constitutive cargo transport from the trans-Golgi network to plasma membrane by Golgi-localized G protein betagamma subunits.

Authors:  Roshanak Irannejad; Philip B Wedegaertner
Journal:  J Biol Chem       Date:  2010-08-18       Impact factor: 5.157

Review 7.  Actin acting at the Golgi.

Authors:  Gustavo Egea; Carla Serra-Peinado; Laia Salcedo-Sicilia; Enric Gutiérrez-Martínez
Journal:  Histochem Cell Biol       Date:  2013-06-27       Impact factor: 4.304

8.  Genome-wide RNAi screen of Ca(2+) influx identifies genes that regulate Ca(2+) release-activated Ca(2+) channel activity.

Authors:  Shenyuan L Zhang; Andriy V Yeromin; Xiang H-F Zhang; Ying Yu; Olga Safrina; Aubin Penna; Jack Roos; Kenneth A Stauderman; Michael D Cahalan
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-02       Impact factor: 11.205

Review 9.  Applications of high-throughput RNA interference screens to problems in cell and developmental biology.

Authors:  Norbert Perrimon; Bernard Mathey-Prevot
Journal:  Genetics       Date:  2007-01       Impact factor: 4.562

Review 10.  Drosophila RNAi screening in a postgenomic world.

Authors:  Chris Bakal
Journal:  Brief Funct Genomics       Date:  2011-07-12       Impact factor: 4.241

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