Literature DB >> 16289965

The role of SMG-1 in nonsense-mediated mRNA decay.

Akio Yamashita1, Isao Kashima, Shigeo Ohno.   

Abstract

SMG-1, a member of the PIKK (phosphoinositide 3-kinase related kinases) family, plays a critical role in the mRNA quality control system termed nonsense-mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) that encode nonfunctional or potentially harmful truncated proteins. SMG-1 directly phosphorylates Upf1, another key component of NMD, and this phosphorylation occurs upon recognition of PTC on post-spliced mRNA during the initial round of translation. At present, a variety of tools are available that can specifically suppress NMD, and it is possible to examine the contribution of NMD in a variety of physiological and pathological conditions.

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Year:  2005        PMID: 16289965     DOI: 10.1016/j.bbapap.2005.10.002

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  37 in total

1.  Smg1 is required for embryogenesis and regulates diverse genes via alternative splicing coupled to nonsense-mediated mRNA decay.

Authors:  David R McIlwain; Qun Pan; Patrick T Reilly; Andrew J Elia; Susan McCracken; Andrew C Wakeham; Annick Itie-Youten; Benjamin J Blencowe; Tak W Mak
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

2.  SMG-8 and SMG-9, two novel subunits of the SMG-1 complex, regulate remodeling of the mRNA surveillance complex during nonsense-mediated mRNA decay.

Authors:  Akio Yamashita; Natsuko Izumi; Isao Kashima; Tetsuo Ohnishi; Bonnie Saari; Yukiko Katsuhata; Reiko Muramatsu; Tomoko Morita; Akihiro Iwamatsu; Takahisa Hachiya; Rie Kurata; Hisashi Hirano; Philip Anderson; Shigeo Ohno
Journal:  Genes Dev       Date:  2009-05-01       Impact factor: 11.361

3.  Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3' UTRs.

Authors:  David Zünd; Andreas R Gruber; Mihaela Zavolan; Oliver Mühlemann
Journal:  Nat Struct Mol Biol       Date:  2013-07-07       Impact factor: 15.369

4.  Inhibition of nonsense-mediated mRNA decay by the natural product pateamine A through eukaryotic initiation factor 4AIII.

Authors:  Yongjun Dang; Woon-Kai Low; Jing Xu; Niels H Gehring; Harry C Dietz; Daniel Romo; Jun O Liu
Journal:  J Biol Chem       Date:  2009-07-01       Impact factor: 5.157

5.  Inter-kingdom conservation of mechanism of nonsense-mediated mRNA decay.

Authors:  Zoltán Kerényi; Zsuzsanna Mérai; László Hiripi; Anna Benkovics; Péter Gyula; Christophe Lacomme; Endre Barta; Ferenc Nagy; Dániel Silhavy
Journal:  EMBO J       Date:  2008-05-01       Impact factor: 11.598

Review 6.  Nonsense-mediated mRNA decay in human cells: mechanistic insights, functions beyond quality control and the double-life of NMD factors.

Authors:  Pamela Nicholson; Hasmik Yepiskoposyan; Stefanie Metze; Rodolfo Zamudio Orozco; Nicole Kleinschmidt; Oliver Mühlemann
Journal:  Cell Mol Life Sci       Date:  2009-10-27       Impact factor: 9.261

7.  The nonsense-mediated mRNA decay SMG-1 kinase is regulated by large-scale conformational changes controlled by SMG-8.

Authors:  Ernesto Arias-Palomo; Akio Yamashita; Israel S Fernández; Rafael Núñez-Ramírez; Yumi Bamba; Natsuko Izumi; Shigeo Ohno; Oscar Llorca
Journal:  Genes Dev       Date:  2011-01-15       Impact factor: 11.361

8.  Identification of hundreds of novel UPF1 target transcripts by direct determination of whole transcriptome stability.

Authors:  Hidenori Tani; Naoto Imamachi; Kazi Abdus Salam; Rena Mizutani; Kenichi Ijiri; Takuma Irie; Tetsushi Yada; Yutaka Suzuki; Nobuyoshi Akimitsu
Journal:  RNA Biol       Date:  2012-10-12       Impact factor: 4.652

Review 9.  Gene expression networks: competing mRNA decay pathways in mammalian cells.

Authors:  Lynne E Maquat; Chenguang Gong
Journal:  Biochem Soc Trans       Date:  2009-12       Impact factor: 5.407

Review 10.  Emerging common themes in regulation of PIKKs and PI3Ks.

Authors:  Harri Lempiäinen; Thanos D Halazonetis
Journal:  EMBO J       Date:  2009-09-24       Impact factor: 11.598

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