Literature DB >> 16432210

Genetic polymorphism and protein conformational plasticity in the calmodulin superfamily: two ways to promote multifunctionality.

Mitsuhiko Ikura1, James B Ames.   

Abstract

Calcium signaling pathways control a variety of cellular events such as gene transcription, protein phosphorylation, nucleotide metabolism, and ion transport. These pathways often involve a large number of calcium-binding proteins collectively known as the calmodulin or EF-hand protein superfamily. Many EF-hand proteins undergo a large conformational change upon binding to Ca(2+) and target proteins. All members of the superfamily share marked sequence homology and similar structural features required to sense Ca(2+). Despite such structural similarities, the functional diversity of EF-hand calcium-binding proteins is extraordinary. Calmodulin itself can bind >300 different proteins, and the many members of the neuronal calcium sensor and S100 protein families collectively recognize a largely different set of target proteins. Recent biochemical and structural studies of many different EF-hand proteins highlight remarkable similarities and variations in conformational responses to the common ligand Ca(2+) and their respective cellular targets. In this review, we examine the essence of molecular recognition activities and the mechanisms by which calmodulin superfamily proteins control a wide variety of Ca(2+) signaling processes.

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Year:  2006        PMID: 16432210      PMCID: PMC1360552          DOI: 10.1073/pnas.0508640103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  129 in total

1.  Molecular cloning of hippocalcin, a novel calcium-binding protein of the recoverin family exclusively expressed in hippocampus.

Authors:  M Kobayashi; K Takamatsu; S Saitoh; M Miura; T Noguchi
Journal:  Biochem Biophys Res Commun       Date:  1992-11-30       Impact factor: 3.575

2.  Target enzyme recognition by calmodulin: 2.4 A structure of a calmodulin-peptide complex.

Authors:  W E Meador; A R Means; F A Quiocho
Journal:  Science       Date:  1992-08-28       Impact factor: 47.728

3.  Neurocalcin family: a novel calcium-binding protein abundant in bovine central nervous system.

Authors:  H Hidaka; K Okazaki
Journal:  Neurosci Res       Date:  1993-02       Impact factor: 3.304

4.  Mapping functional domains of the guanylate cyclase regulator protein, GCAP-2.

Authors:  E V Olshevskaya; S Boikov; A Ermilov; D Krylov; J B Hurley; A M Dizhoor
Journal:  J Biol Chem       Date:  1999-04-16       Impact factor: 5.157

5.  Analysis of calcium-dependent interaction between amino-terminal conserved region of calpastatin functional domain and calmodulin-like domain of mu-calpain large subunit.

Authors:  H Q Yang; H Ma; E Takano; M Hatanaka; M Maki
Journal:  J Biol Chem       Date:  1994-07-22       Impact factor: 5.157

6.  Frequenin--a novel calcium-binding protein that modulates synaptic efficacy in the Drosophila nervous system.

Authors:  O Pongs; J Lindemeier; X R Zhu; T Theil; D Engelkamp; I Krah-Jentgens; H G Lambrecht; K W Koch; J Schwemer; R Rivosecchi
Journal:  Neuron       Date:  1993-07       Impact factor: 17.173

7.  The effect of Met-->Leu mutations on calmodulin's ability to activate cyclic nucleotide phosphodiesterase.

Authors:  M Zhang; M Li; J H Wang; H J Vogel
Journal:  J Biol Chem       Date:  1994-06-03       Impact factor: 5.157

8.  Modulation of calmodulin plasticity in molecular recognition on the basis of x-ray structures.

Authors:  W E Meador; A R Means; F A Quiocho
Journal:  Science       Date:  1993-12-10       Impact factor: 47.728

9.  Calcium-myristoyl protein switch.

Authors:  S Zozulya; L Stryer
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

10.  Three-dimensional structure of recoverin, a calcium sensor in vision.

Authors:  K M Flaherty; S Zozulya; L Stryer; D B McKay
Journal:  Cell       Date:  1993-11-19       Impact factor: 41.582

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  85 in total

1.  Activation of the edema factor of Bacillus anthracis by calmodulin: evidence of an interplay between the EF-calmodulin interaction and calcium binding.

Authors:  Elodie Laine; Leandro Martínez; Arnaud Blondel; Thérèse E Malliavin
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

2.  Structural basis for Ca2+-induced activation and dimerization of estrogen receptor α by calmodulin.

Authors:  Yonghong Zhang; Zhigang Li; David B Sacks; James B Ames
Journal:  J Biol Chem       Date:  2012-01-23       Impact factor: 5.157

3.  Recognition of β-calcineurin by the domains of calmodulin: thermodynamic and structural evidence for distinct roles.

Authors:  Susan E O'Donnell; Liping Yu; C Andrew Fowler; Madeline A Shea
Journal:  Proteins       Date:  2010-12-06

Review 4.  Protein reconstitution and three-dimensional domain swapping: benefits and constraints of covalency.

Authors:  Jannette Carey; Stina Lindman; Mikael Bauer; Sara Linse
Journal:  Protein Sci       Date:  2007-11       Impact factor: 6.725

5.  Dynamics and energetics: a consensus analysis of the impact of calcium on EF-CaM protein complex.

Authors:  Elodie Laine; Arnaud Blondel; Thérèse E Malliavin
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

Review 6.  Recent advances in calcium/calmodulin-mediated signaling with an emphasis on plant-microbe interactions.

Authors:  B W Poovaiah; Liqun Du; Huizhong Wang; Tianbao Yang
Journal:  Plant Physiol       Date:  2013-09-06       Impact factor: 8.340

7.  Mouse spermatozoa contain a nuclease that is activated by pretreatment with EGTA and subsequent calcium incubation.

Authors:  Segal M Boaz; Kenneth Dominguez; Jeffrey A Shaman; W Steven Ward
Journal:  J Cell Biochem       Date:  2008-04-01       Impact factor: 4.429

8.  Identification of a Ca2+-binding domain in the rubella virus nonstructural protease.

Authors:  Yubin Zhou; Wen-Pin Tzeng; Wei Yang; Yumei Zhou; Yiming Ye; Hsiau-wei Lee; Teryl K Frey; Jenny Yang
Journal:  J Virol       Date:  2007-05-02       Impact factor: 5.103

9.  Calcium-dependent association of calmodulin with the rubella virus nonstructural protease domain.

Authors:  Yubin Zhou; Wen-Pin Tzeng; Hing-Cheung Wong; Yiming Ye; Jie Jiang; Yanyi Chen; Yun Huang; Suganthi Suppiah; Teryl K Frey; Jenny J Yang
Journal:  J Biol Chem       Date:  2010-01-19       Impact factor: 5.157

10.  Arabidopsis potential calcium sensors regulate nitric oxide levels and the transition to flowering.

Authors:  Yu-Chang Tsai; Nikkí A Delk; Naweed I Chowdhury; Janet Braam
Journal:  Plant Signal Behav       Date:  2007-11
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