Literature DB >> 16411949

Plant metabolomics: from holistic hope, to hype, to hot topic.

Robert D Hall1.   

Abstract

In a short time, plant metabolomics has gone from being just an ambitious concept to being a rapidly growing, valuable technology applied in the stride to gain a more global picture of the molecular organization of multicellular organisms. The combination of improved analytical capabilities with newly designed, dedicated statistical, bioinformatics and data mining strategies, is beginning to broaden the horizons of our understanding of how plants are organized and how metabolism is both controlled but highly flexible. Metabolomics is predicted to play a significant, if not indispensable role in bridging the phenotype-genotype gap and thus in assisting us in our desire for full genome sequence annotation as part of the quest to link gene to function. Plants are a fabulously rich source of diverse functional biochemicals and metabolomics is also already proving valuable in an applied context. By creating unique opportunities for us to interrogate plant systems and characterize their biochemical composition, metabolomics will greatly assist in identifying and defining much of the still unexploited biodiversity available today.

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Mesh:

Year:  2006        PMID: 16411949     DOI: 10.1111/j.1469-8137.2005.01632.x

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  84 in total

1.  Between Metabolite Relationships: an essential aspect of metabolic change.

Authors:  Jeroen J Jansen; Ewa Szymańska; Huub C J Hoefsloot; Doris M Jacobs; Katrin Strassburg; Age K Smilde
Journal:  Metabolomics       Date:  2011-05-24       Impact factor: 4.290

Review 2.  Metabolomics of forage plants: a review.

Authors:  Susanne Rasmussen; Anthony J Parsons; Christopher S Jones
Journal:  Ann Bot       Date:  2012-02-19       Impact factor: 4.357

Review 3.  Metabolic networks: how to identify key components in the regulation of metabolism and growth.

Authors:  Mark Stitt; Ronan Sulpice; Joost Keurentjes
Journal:  Plant Physiol       Date:  2009-12-11       Impact factor: 8.340

4.  NMR-based metabolomic analysis of plants.

Authors:  Hye Kyong Kim; Young Hae Choi; Robert Verpoorte
Journal:  Nat Protoc       Date:  2010-02-25       Impact factor: 13.491

5.  Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry.

Authors:  Warwick B Dunn; David Broadhurst; Paul Begley; Eva Zelena; Sue Francis-McIntyre; Nadine Anderson; Marie Brown; Joshau D Knowles; Antony Halsall; John N Haselden; Andrew W Nicholls; Ian D Wilson; Douglas B Kell; Royston Goodacre
Journal:  Nat Protoc       Date:  2011-06-30       Impact factor: 13.491

6.  Metabolomics approach for determining growth-specific metabolites based on Fourier transform ion cyclotron resonance mass spectrometry.

Authors:  Hiroki Takahashi; Kosuke Kai; Yoko Shinbo; Kenichi Tanaka; Daisaku Ohta; Taku Oshima; Md Altaf-Ul-Amin; Ken Kurokawa; Naotake Ogasawara; Shigehiko Kanaya
Journal:  Anal Bioanal Chem       Date:  2008-06-16       Impact factor: 4.142

7.  Inter-laboratory reproducibility of fast gas chromatography-electron impact-time of flight mass spectrometry (GC-EI-TOF/MS) based plant metabolomics.

Authors:  J William Allwood; Alexander Erban; Sjaak de Koning; Warwick B Dunn; Alexander Luedemann; Arjen Lommen; Lorraine Kay; Ralf Löscher; Joachim Kopka; Royston Goodacre
Journal:  Metabolomics       Date:  2009-07-24       Impact factor: 4.290

8.  Isolation of intact sub-dermal secretory cavities from Eucalyptus.

Authors:  Jason Qd Goodger; Allison M Heskes; Madeline C Mitchell; Drew J King; Elizabeth H Neilson; Ian E Woodrow
Journal:  Plant Methods       Date:  2010-09-01       Impact factor: 4.993

9.  NMR-based metabolomics reveals that plant-derived smoke stimulates root growth via affecting carbohydrate and energy metabolism in maize.

Authors:  Şükrü Serter Çatav; Emine Sonay Elgin; Çağdaş Dağ; Jaime L Stark; Köksal Küçükakyüz
Journal:  Metabolomics       Date:  2018-10-15       Impact factor: 4.290

10.  Protein and metabolite analysis reveals permanent induction of stress defense and cell regeneration processes in a tobacco cell suspension culture.

Authors:  Rico Lippmann; Stephanie Kaspar; Twan Rutten; Michael Melzer; Jochen Kumlehn; Andrea Matros; Hans-Peter Mock
Journal:  Int J Mol Sci       Date:  2009-07-06       Impact factor: 6.208

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