Literature DB >> 16390146

Selective protein-protein interactions driven by a phenylalanine interface.

Nicholas C Yoder1, Krishna Kumar.   

Abstract

Highly specific protein-protein interfaces have been the subject of considerable study for their potential utility in disrupting or interrogating cellular signaling and control networks. We report that coiled-coil sequences decorated with phenylalanine core residues fold into stable alpha-helical bundles and that these self-sort from similar peptide assemblies with aliphatic core side chains. For self-assembled ensembles derived from 30-residue monomeric peptides, the DeltaG of specificity is -1.5 kcal/mol, comparable with earlier self-sorting coiled-coil systems. Intriguingly, although this interface is constructed from canonical amino acids, it does not appear to have been exploited in native proteins.

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Year:  2006        PMID: 16390146     DOI: 10.1021/ja055494k

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

Review 1.  Structural specificity in coiled-coil interactions.

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Journal:  Curr Opin Struct Biol       Date:  2008-06-12       Impact factor: 6.809

2.  A quantitative model for the transcription of 2D patterns into functional 3D architectures.

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4.  Crystal structure of a trimeric form of the K(V)7.1 (KCNQ1) A-domain tail coiled-coil reveals structural plasticity and context dependent changes in a putative coiled-coil trimerization motif.

Authors:  Qiang Xu; Daniel L Minor
Journal:  Protein Sci       Date:  2009-10       Impact factor: 6.725

5.  Quasiracemate Crystal Structures of Magainin 2 Derivatives Support the Functional Significance of the Phenylalanine Zipper Motif.

Authors:  Zvi Hayouka; Nicole C Thomas; David E Mortenson; Kenneth A Satyshur; Bernard Weisblum; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2015-09-10       Impact factor: 15.419

6.  Evidence for phenylalanine zipper-mediated dimerization in the X-ray crystal structure of a magainin 2 analogue.

Authors:  Zvi Hayouka; David E Mortenson; Dale F Kreitler; Bernard Weisblum; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2013-10-08       Impact factor: 15.419

7.  Heterotrimeric coiled coils with core residue urea side chains.

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Journal:  J Org Chem       Date:  2008-12-19       Impact factor: 4.354

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Authors:  Michael W Giuliano; W Seth Horne; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2009-07-29       Impact factor: 15.419

9.  Investigation of the network of preferred interactions in an artificial coiled-coil association using the peptide array technique.

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  10 in total

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