Literature DB >> 16382479

Isostructurality, polymorphism and mechanical properties of some hexahalogenated benzenes: the nature of halogen...halogen interactions.

C Malla Reddy1, Michael T Kirchner, Ravi C Gundakaram, K Anantha Padmanabhan, Gautam R Desiraju.   

Abstract

The nature of intermolecular interactions between halogen atoms, X...X (X = Cl, Br, I), continues to be of topical interest because these interactions may be used as design elements in crystal engineering. Hexahalogenated benzenes (C6Cl(6-n)Br(n), C6Cl(6-n)I(n), C6Br(6-n)I(n)) crystallise in two main packing modes, which take the monoclinic space group P2(1)/n and the triclinic space group P1. The former, which is isostructural to C6Cl6, is more common. For molecules that lack inversion symmetry, adoption of this monoclinic structure would necessarily lead to crystallographic disorder. In C6Cl6, the planar molecules form Cl...Cl contacts and also pi...pi stacking interactions. When crystals of C6Cl6 are compressed mechanically along their needle length, that is, [010], a bending deformation takes place, because of the stronger interactions in the stacking direction. Further compression propagates consecutively in a snakelike motion through the crystal, similar to what has been suggested for the motion of dislocations. The bending of C6Cl6 crystals is related to the weakness of the Cl...Cl interactions compared with the stronger pi...pi stacking interactions. The triclinic packing is less common and is restricted to molecules that have a symmetrical (1,3,5- and 2,4,6-) halogen substitution pattern. This packing type is characterised by specific, polarisation-induced X...X interactions that result in threefold-symmetrical X3 synthons, especially when X = I; this leads to a layered pseudohexagonal structure in which successive planar layers are inversion related and stacked so that bumps in one layer fit into the hollows of the next in a space-filling manner. The triclinic crystals shear on application of a mechanical stress only along the plane of deformation. This shearing arises from the sliding of layers against one another. Nonspecificity of the weak interlayer interactions here is demonstrated by the structure of twinned crystals of these compounds. One of the compounds studied (1,3,5-tribromo-2,4,6-triiodobenzene) is dimorphic, adopting both the monoclinic and triclinic structures, and the reasons for polymorphism are suggested. To summarise, both chemical and geometrical models need to be considered for X...X interactions in hexahalogenated benzenes. The X...X interactions in the monoclinic group are nonspecific, whereas in the triclinic group some X...X interactions are anisotropic, chemically specific and crystal-structure directing.

Entities:  

Year:  2006        PMID: 16382479     DOI: 10.1002/chem.200500983

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  26 in total

1.  Spatially resolved analysis of short-range structure perturbations in a plastically bent molecular crystal.

Authors:  Manas K Panda; Soumyajit Ghosh; Nobuhiro Yasuda; Taro Moriwaki; Goutam Dev Mukherjee; C Malla Reddy; Panče Naumov
Journal:  Nat Chem       Date:  2014-12-08       Impact factor: 24.427

2.  Chirality-controlled spontaneous twisting of crystals due to thermal topochemical reaction.

Authors:  Rishika Rai; Baiju P Krishnan; Kana M Sureshan
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-05       Impact factor: 11.205

Review 3.  The Pnictogen Bond: The Covalently Bound Arsenic Atom in Molecular Entities in Crystals as a Pnictogen Bond Donor.

Authors:  Arpita Varadwaj; Pradeep R Varadwaj; Helder M Marques; Koichi Yamashita
Journal:  Molecules       Date:  2022-05-25       Impact factor: 4.927

4.  Tetra-phenyl-phospho-nium iodide-1,3,5-tri-fluoro-2,4,6-tri-iodo-benzene-methanol (3/4/1).

Authors:  Gabriella Cavallo; Pierangelo Metrangolo; Tullio Pilati; Giuseppe Resnati; Giancarlo Terraneo
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-11

5.  3,3-Dichloro-1-(chloro-meth-yl)indolin-2-one.

Authors:  Yao Wang; Chong-Qing Wan; Tingting Zheng; Sheng-Li Cao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-20

6.  8,10-Diiodo-2,6-dioxo-4λ-ioda-3,5-dioxatricyclo-[5.3.1.0]undeca-1(11),7,9-triene-9-carb-oxy-lic acid.

Authors:  Daopeng Sheng; Lu Han; Yi Zhang; Yanzhao Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-17

7.  2-(4-Chloro-phen-yl)chromen-4-one.

Authors:  Shailja Singh; Manavendra K Singh; Alka Agarwal; Satish K Awasthi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-05

8.  Anomalous halogen bonds in the crystal structures of 1,2,3-tri-bromo-5-nitro-benzene and 1,3-di-bromo-2-iodo-5-nitro-benzene.

Authors:  José A Romero; Gerardo Aguirre Hernández; Sylvain Bernès
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-07-22

9.  Controlling Topology within Halogen-Bonded Networks by Varying the Regiochemistry of the Cyclobutane-Based Nodes.

Authors:  Taylor J Dunning; Daniel K Unruh; Eric Bosch; Ryan H Groeneman
Journal:  Molecules       Date:  2021-05-25       Impact factor: 4.411

10.  Halogen bonds in some dihalogenated phenols: applications to crystal engineering.

Authors:  Arijit Mukherjee; Gautam R Desiraju
Journal:  IUCrJ       Date:  2013-10-18       Impact factor: 4.769

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