Literature DB >> 16347733

Calculation of cell production from [h]thymidine incorporation with freshwater bacteria.

J D Smits1, B Riemann.   

Abstract

The conversion factor for the calculation of bacterial production from rates of [H]thymidine incorporation was examined with diluted batch cultures of freshwater bacteria. Natural bacterial assemblages were grown in aged, normal, and enriched media at 10 to 20 degrees C. The generation time during 101 growth cycles covered a range from 4 to >200 h. The average conversion factor was 2.15 x 10 cells mol of thymidine incorporated into the trichloroacetic acid (TCA) precipitate (standard error = 0.29 x 10; n = 54), when the generation time exceeded 20 h. At generation times of <20 h, the average conversion factor was 11.8 x 10 cells mol of thymidine incorporated into TCA precipitate (standard error = 1.72 x 10; n = 47). The amount of radioactivity in purified DNA increased with decreasing generation time and increasing conversion factor (calculated from the TCA precipitate), corresponding to a decrease in the percentage in protein. The conversion factors calculated from purified DNA or from the TCA precipitate gave the same variability. Conversion factors did not change significantly with the medium, but were significantly higher at 20 degrees C than at 15 and 10 degrees C. A detailed examination of the [H]thymidine concentrations that were needed to achieve maximum labeling in DNA was carried out 6 times during a complete growth cycle. During periods with low generation times and high conversion factors, 15 nM [H]thymidine was enough for the maximum labeling of the TCA precipitate. This suggests that incorporation of [H]thymidine into DNA is probably limited by uptake during periods with generation times of <20 h and that freshwater bacterioplankton cell production sometimes is underestimated when a conversion factor of 2.15 x 10 cells mol of thymidine incorporated is used.

Entities:  

Year:  1988        PMID: 16347733      PMCID: PMC202839          DOI: 10.1128/aem.54.9.2213-2219.1988

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  9 in total

1.  Seasonal bacterial production in a dimictic lake as measured by increases in cell numbers and thymidine incorporation.

Authors:  C R Lovell; A Konopka
Journal:  Appl Environ Microbiol       Date:  1985-03       Impact factor: 4.792

2.  Annual cycle of bacterial secondary production in five aquatic habitats of the okefenokee swamp ecosystem.

Authors:  R E Murray; R E Hodson
Journal:  Appl Environ Microbiol       Date:  1985-03       Impact factor: 4.792

3.  Potential importance of fish predation and zooplankton grazing on natural populations of freshwater bacteria.

Authors:  B Riemann
Journal:  Appl Environ Microbiol       Date:  1985-08       Impact factor: 4.792

4.  Do bacteria-sized marine eukaryotes consume significant bacterial production?

Authors:  J A Fuhrman; G B McManus
Journal:  Science       Date:  1984-06-15       Impact factor: 47.728

5.  Estimating Bacterioplankton Production by Measuring [H]thymidine Incorporation in a Eutrophic Swedish Lake.

Authors:  R T Bell; G M Ahlgren; I Ahlgren
Journal:  Appl Environ Microbiol       Date:  1983-06       Impact factor: 4.792

6.  Spatial and Temporal Variations in Bacterial Macromolecule Labeling with [methyl-H]Thymidine in a Hypertrophic Lake.

Authors:  R D Robarts; R J Wicks; L M Sephton
Journal:  Appl Environ Microbiol       Date:  1986-12       Impact factor: 4.792

7.  Bacterioplankton secondary production estimates for coastal waters of british columbia, antarctica, and california.

Authors:  J A Fuhrman; F Azam
Journal:  Appl Environ Microbiol       Date:  1980-06       Impact factor: 4.792

8.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

9.  Estimates of bacterial growth from changes in uptake rates and biomass.

Authors:  D Kirchman; H Ducklow; R Mitchell
Journal:  Appl Environ Microbiol       Date:  1982-12       Impact factor: 4.792

  9 in total
  24 in total

1.  Effects of toxic substances on natural bacterial assemblages determined by means of [h]thymidine incorporation.

Authors:  B Riemann; P Lindgaard-Jørgensen
Journal:  Appl Environ Microbiol       Date:  1990-01       Impact factor: 4.792

2.  [H]thymidine incorporation to estimate growth rates of anaerobic bacterial strains.

Authors:  A Winding
Journal:  Appl Environ Microbiol       Date:  1992-08       Impact factor: 4.792

3.  Bacterial production and growth rate estimation from [h]thymidine incorporation for attached and free-living bacteria in aquatic systems.

Authors:  J Iriberri; M Unanue; B Ayo; I Barcina; L Egea
Journal:  Appl Environ Microbiol       Date:  1990-02       Impact factor: 4.792

4.  Effect of growth rate and starvation-survival on the viability and stability of a psychrophilic marine bacterium.

Authors:  C L Moyer; R Y Morita
Journal:  Appl Environ Microbiol       Date:  1989-05       Impact factor: 4.792

5.  Toxic effects on bacterial metabolism of the redox dye 5-cyano-2,3-ditolyl tetrazolium chloride.

Authors:  S Ullrich; B Karrasch; H Hoppe; K Jeskulke; M Mehrens
Journal:  Appl Environ Microbiol       Date:  1996-12       Impact factor: 4.792

6.  Channeling of bacterioplanktonic production toward phagotrophic flagellates and ciliates under different seasonal conditions in a river.

Authors:  J Iriberri; B Ayo; M Unanue; I Barcina; L Egea
Journal:  Microb Ecol       Date:  1993-09       Impact factor: 4.552

7.  A Study on the lack of [methyl-(3)H] thymidine uptake and incorporation by chemolithotrophic bacteria.

Authors:  B H Johnstone; R D Jones
Journal:  Microb Ecol       Date:  1989-07       Impact factor: 4.552

8.  Microbial biomass and activity in subsurface sediments from Vejen, Denmark.

Authors:  H J Albrechtsen; A Winding
Journal:  Microb Ecol       Date:  1992-05       Impact factor: 4.552

9.  Qualitative importance of the microbial loop and plankton community structure in a eutrophic lake during a bloom of cyanobacteria.

Authors:  K Christoffersen; B Riemann; L R Hansen; A Klysner; H B Sørensen
Journal:  Microb Ecol       Date:  1990-12       Impact factor: 4.552

10.  Attached and free-living bacteria: Production and polymer hydrolysis during a diatom bloom.

Authors:  M Middelboe; M Søndergaard; Y Letarte; N H Borch
Journal:  Microb Ecol       Date:  1995-05       Impact factor: 4.552

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