Literature DB >> 16347712

Experimental evaluation of conversion factors for the [h]thymidine incorporation assay of bacterial secondary productivity.

M F Coveney1, R G Wetzel.   

Abstract

The relationship between bacterial growth and incorporation of [methyl-H]thymidine in oligotrophic lake water cultures was investigated. Prescreening, dilution, and addition of organic and inorganic nutrients were treatments used to prevent bacterivory and stimulate bacterial growth. Growth in unmanipulated samples was estimated through separate measurements of grazing losses. Both bacterial number and biovolume growth responses were measured, and incorporation of [H]thymidine in both total macromolecules and nucleic acids was assayed. The treatments had significant effects on conversion factors used to relate thymidine incorporation to bacterial growth. Cell number-based factors ranged from 1.1 x 10 to 38 x 10 cells mol of total thymidine incorporation and varied with treatment up to 10-fold for the same initial bacterial assemblage. In contrast, cell biovolume-based conversion factors were similar for two treatment groups across a 16-fold range of [H]thymidine incorporation rates: 5.54 x 10 mum mol of total thymidine incorporation and 15.2 x 10 mum mol of nucleic acid incorporation. Much of the variation in cell number-based conversion factors was related to changes in apparent mean cell volume of produced bacteria. Phosphorus addition stimulated [H]thymidine incorporation more than it increased bacterial growth, which resulted in low conversion factors.

Entities:  

Year:  1988        PMID: 16347712      PMCID: PMC202795          DOI: 10.1128/aem.54.8.2018-2026.1988

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  26 in total

1.  Seasonal bacterial production in a dimictic lake as measured by increases in cell numbers and thymidine incorporation.

Authors:  C R Lovell; A Konopka
Journal:  Appl Environ Microbiol       Date:  1985-03       Impact factor: 4.792

2.  Rate of bacterial mortality in aquatic environments.

Authors:  P Servais; G Billen; J V Rego
Journal:  Appl Environ Microbiol       Date:  1985-06       Impact factor: 4.792

3.  Further Verification of the Isotope Dilution Approach for Estimating the Degree of Participation of [H]thymidine in DNA Synthesis in Studies of Aquatic Bacterial Production.

Authors:  R T Bell
Journal:  Appl Environ Microbiol       Date:  1986-11       Impact factor: 4.792

4.  Estimating Bacterioplankton Production by Measuring [H]thymidine Incorporation in a Eutrophic Swedish Lake.

Authors:  R T Bell; G M Ahlgren; I Ahlgren
Journal:  Appl Environ Microbiol       Date:  1983-06       Impact factor: 4.792

5.  Laboratory calibrations of the [h]adenine technique for measuring rates of RNA and DNA synthesis in marine microorganisms.

Authors:  C D Winn; D M Karl
Journal:  Appl Environ Microbiol       Date:  1984-04       Impact factor: 4.792

6.  Spatial and Temporal Variations in Bacterial Macromolecule Labeling with [methyl-H]Thymidine in a Hypertrophic Lake.

Authors:  R D Robarts; R J Wicks; L M Sephton
Journal:  Appl Environ Microbiol       Date:  1986-12       Impact factor: 4.792

Review 7.  Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats.

Authors:  J T Staley; A Konopka
Journal:  Annu Rev Microbiol       Date:  1985       Impact factor: 15.500

8.  Response of marine bacterioplankton to differential filtration and confinement.

Authors:  R L Ferguson; E N Buckley; A V Palumbo
Journal:  Appl Environ Microbiol       Date:  1984-01       Impact factor: 4.792

9.  Bacterial growth rate in the sea: direct analysis by thymidine autoradiography.

Authors:  T D Brock
Journal:  Science       Date:  1967-01-06       Impact factor: 47.728

10.  Further studies on thymidine kinase: distribution pattern of the enzyme in bacteria.

Authors:  H Saito; H Tomioka; S Ohkido
Journal:  J Gen Microbiol       Date:  1985-11
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  17 in total

1.  Exploring bacteriplankton growth and protein synthesis to determine conversion factors across a gradient of dissolved organic matter.

Authors:  E Pulido-Villena; I Reche
Journal:  Microb Ecol       Date:  2003-07       Impact factor: 4.552

2.  Sample dilution and bacterial community composition influence empirical leucine-to-carbon conversion factors in surface waters of the world's oceans.

Authors:  Eva Teira; Víctor Hernando-Morales; Francisco M Cornejo-Castillo; Laura Alonso-Sáez; Hugo Sarmento; Joaquín Valencia-Vila; Teresa Serrano Catalá; Marta Hernández-Ruiz; Marta M Varela; Isabel Ferrera; Xosé Anxelu Gutiérrez Morán; Josep M Gasol
Journal:  Appl Environ Microbiol       Date:  2015-09-25       Impact factor: 4.792

3.  Effects of toxic substances on natural bacterial assemblages determined by means of [h]thymidine incorporation.

Authors:  B Riemann; P Lindgaard-Jørgensen
Journal:  Appl Environ Microbiol       Date:  1990-01       Impact factor: 4.792

4.  Assessment of [h]thymidine incorporation into DNA as a method to determine bacterial productivity in stream bed sediments.

Authors:  L A Kaplan; T L Bott; J K Bielicki
Journal:  Appl Environ Microbiol       Date:  1992-11       Impact factor: 4.792

5.  Effects of nutrients on specific growth rate of bacterioplankton in oligotrophic lake water cultures.

Authors:  M F Coveney; R G Wetzel
Journal:  Appl Environ Microbiol       Date:  1992-01       Impact factor: 4.792

6.  Bacterial production and growth rate estimation from [h]thymidine incorporation for attached and free-living bacteria in aquatic systems.

Authors:  J Iriberri; M Unanue; B Ayo; I Barcina; L Egea
Journal:  Appl Environ Microbiol       Date:  1990-02       Impact factor: 4.792

7.  Underestimation of DNA synthesis by [h]thymidine incorporation in marine bacteria.

Authors:  W H Jeffrey; J H Paul
Journal:  Appl Environ Microbiol       Date:  1988-12       Impact factor: 4.792

8.  Comparison of rates of flagellate bacterivory and bacterial production in a marine coastal system.

Authors:  I Barcina; B Ayo; M Unanue; L Egea; J Iriberri
Journal:  Appl Environ Microbiol       Date:  1992-12       Impact factor: 4.792

9.  A Study on the lack of [methyl-(3)H] thymidine uptake and incorporation by chemolithotrophic bacteria.

Authors:  B H Johnstone; R D Jones
Journal:  Microb Ecol       Date:  1989-07       Impact factor: 4.552

10.  Catabolism of tritiated thymidine by aquatic microbial communities and incorporation of tritium into RNA and protein.

Authors:  A M Brittain; D M Karl
Journal:  Appl Environ Microbiol       Date:  1990-05       Impact factor: 4.792

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