Literature DB >> 16345366

Conversion of biovolume measurements of soil organisms, grown under various moisture tensions, to biomass and their nutrient content.

J A van Veen1, E A Paul.   

Abstract

Direct microscopic measurements of biomass in soil require conversion factors for calculation of the mass of microorganisms from the measured volumes. These factors were determined for two bacteria, five fungi, and a yeast isolated from soil. Moisture stress conditions occurring in nature were simulated by growth in two media using shake cultures, on agar plates, and on membranes held at 34, 330, and 1,390 kPa of suction. The observed conversion factors, i.e., the ratio between dry weight and wet volume, generally increased with increasing moisture stress. The ratios for fungi ranged from 0.11 to 0.41 g/cm with an average of 0.33 g/cm. Correction of earlier data assuming 80% water and a wet-weight specific gravity of 1.1 would require a conversion factor of 1.44. The dry-weight specific gravity of bacteria and yeasts ranged from 0.38 to 1.4 g/cm with an average of 0.8 g/cm. These high values can only occur at 10% ash if no more than 50% of the cell is water, and a specific conversion factor to correct past data for bacterial biomass has not yet been suggested. The high conversion factors for bacteria and yeast could not be explained by shrinkage of cells due to heat fixing, but shrinkage during preparation could not be completely discounted. Moisture stress affected the C, N, and P content of the various organisms, with the ash contents increasing with increasing moisture stress. Although further work is necessary to obtain accurate conversion factors between biovolume and biomass, especially for bacteria, this study clearly indicates that existing data on the specific gravity and the water and nutrient content of microorganisms grown in shake cultures cannot be applied when quantifying the soil microbial biomass.

Entities:  

Year:  1979        PMID: 16345366      PMCID: PMC243282          DOI: 10.1128/aem.37.4.686-692.1979

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  6 in total

1.  Simplified procedures for releasing and concentrating microorganisms from soil for transmission electron microscopy viewing as thin-sectioned and frozen-etched preparations.

Authors:  D L Balkwill; D P Labeda; L E Casida
Journal:  Can J Microbiol       Date:  1975-03       Impact factor: 2.419

2.  A comparison of a direct- and a plate counting technique for the quantitative estimation of soil micro-organisms.

Authors:  F A SKINNER; P C JONES; J E MOLLISON
Journal:  J Gen Microbiol       Date:  1952-05

3.  Microscopic counting and adenosine 5'-triphosphate measurement in determining microbial growth in soils.

Authors:  E A Paul; R L Johnson
Journal:  Appl Environ Microbiol       Date:  1977-09       Impact factor: 4.792

4.  Microorganisms in unamended soil as observed by various forms of microscopy and staining.

Authors:  L E Casida
Journal:  Appl Microbiol       Date:  1971-06

5.  An investigation of errors in direct counts of aquatic bacteria by epifluorescence microscopy, with reference to a new method for dyeing membrane filters.

Authors:  J G Jones; B M Simon
Journal:  J Appl Bacteriol       Date:  1975-12

6.  The use of fluorescein isothiocyanate in the determination of the bacterial biomass of grassland soil.

Authors:  L A Babiuk; E A Paul
Journal:  Can J Microbiol       Date:  1970-02       Impact factor: 2.419

  6 in total
  27 in total

1.  Bacterial biovolume and biomass estimations.

Authors:  G Bratbak
Journal:  Appl Environ Microbiol       Date:  1985-06       Impact factor: 4.792

2.  Buoyant densities and dry-matter contents of microorganisms: conversion of a measured biovolume into biomass.

Authors:  L R Bakken; R A Olsen
Journal:  Appl Environ Microbiol       Date:  1983-04       Impact factor: 4.792

3.  Physical characterization and quantification of bacteria by sedimentation field-flow fractionation.

Authors:  R V Sharma; R T Edwards; R Beckett
Journal:  Appl Environ Microbiol       Date:  1993-06       Impact factor: 4.792

4.  Frequency of dividing cells as an estimator of bacterial productivity.

Authors:  S Y Newell; R R Christian
Journal:  Appl Environ Microbiol       Date:  1981-07       Impact factor: 4.792

5.  Microcomputer-assisted biomass determination of plankton bacteria on scanning electron micrographs.

Authors:  C Krambeck; H J Krambeck; J Overbeck
Journal:  Appl Environ Microbiol       Date:  1981-07       Impact factor: 4.792

6.  On the relation between dry matter and volume of bacteria.

Authors:  S Norland; M Heldal; O Tumyr
Journal:  Microb Ecol       Date:  1987-03       Impact factor: 4.552

7.  Effects of freeze-thaw stress on bacterial populations in soil microcosms.

Authors:  C R Morley; J A Trofymow; D C Coleman; C Cambardella
Journal:  Microb Ecol       Date:  1983-12       Impact factor: 4.552

8.  The physical base of marine bacterial ecology.

Authors:  D K Button
Journal:  Microb Ecol       Date:  1994-09       Impact factor: 4.552

9.  Fungi and macroaggregation in deep-sea sediments.

Authors:  Samir Damare; Chandralata Raghukumar
Journal:  Microb Ecol       Date:  2007-11-11       Impact factor: 4.552

10.  Soil resource supply influences faunal size-specific distributions in natural food webs.

Authors:  Christian Mulder; Henri A Den Hollander; J Arie Vonk; Axel G Rossberg; Gerard A J M Jagers op Akkerhuis; Gregor W Yeates
Journal:  Naturwissenschaften       Date:  2009-05-14
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