Literature DB >> 16346263

Buoyant densities and dry-matter contents of microorganisms: conversion of a measured biovolume into biomass.

L R Bakken1, R A Olsen.   

Abstract

Several isolates of bacteria and fungi from soil, together with cells released directly from soil, were studied with respect to buoyant density and dry weight. The specific volume (cubic centimeters per gram) of wet cells as measured in density gradients of colloidal silica was correlated with the percent dry weight of the cells and found to be in general agreement with calculations based on the partial specific volume of major cell components. The buoyant density of pure bacterial cultures ranged from 1.035 to 1.093 g/cm, and their dry-matter content ranged from 12 to 33% (wt/wt). Average values proposed for the conversion of bacterial biovolume into biomass dry weight are 1.09 g/cm and 30% dry matter. Fungal hyphae had buoyant densities ranging from 1.08 to 1.11 g/cm, and their dry-matter content ranged from 18 to 25% (wt/wt). Average values proposed for the conversion of hyphal biovolume into biomass dry weight are 1.09 g/cm and 21% dry matter. Three of the bacterial isolates were found to have cell capsules. The calculated buoyant density and percent dry weight of these capsules varied from 1.029 g/cm and 7% dry weight to 1.084 g/cm and 44% dry weight. The majority of the fungi were found to produce large amounts of extracellular material when grown in liquid cultures. This material was not produced when the fungi were grown on either sterile spruce needles or membrane filters on an agar surface. Fungal hyphae in litter were shown to be free from extracellular materials.

Entities:  

Year:  1983        PMID: 16346263      PMCID: PMC242437          DOI: 10.1128/aem.45.4.1188-1195.1983

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  7 in total

1.  The separation of cells and subcellular particles by colloidal silica density gradient centrifugation.

Authors:  D A Wolff
Journal:  Methods Cell Biol       Date:  1975       Impact factor: 1.441

2.  Conversion of biovolume measurements of soil organisms, grown under various moisture tensions, to biomass and their nutrient content.

Authors:  J A van Veen; E A Paul
Journal:  Appl Environ Microbiol       Date:  1979-04       Impact factor: 4.792

3.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

4.  Buoyant densities and hydration of nucleic acids, proteins and nucleoprotein complexes in metrizamide.

Authors:  G D Birnie; D Rickwood; A Hell
Journal:  Biochim Biophys Acta       Date:  1973-12-07

5.  Microorganisms in unamended soil as observed by various forms of microscopy and staining.

Authors:  L E Casida
Journal:  Appl Microbiol       Date:  1971-06

6.  Responses of indigenous microorganisms to soil incubation as viewed by transmission electron microscopy of cell thin sections.

Authors:  H C Bae; L E Casida
Journal:  J Bacteriol       Date:  1973-03       Impact factor: 3.490

7.  The use of fluorescein isothiocyanate in the determination of the bacterial biomass of grassland soil.

Authors:  L A Babiuk; E A Paul
Journal:  Can J Microbiol       Date:  1970-02       Impact factor: 2.419

  7 in total
  33 in total

1.  Bacterial biovolume and biomass estimations.

Authors:  G Bratbak
Journal:  Appl Environ Microbiol       Date:  1985-06       Impact factor: 4.792

2.  Separation and purification of bacteria from soil.

Authors:  L R Bakken
Journal:  Appl Environ Microbiol       Date:  1985-06       Impact factor: 4.792

3.  Physical characterization and quantification of bacteria by sedimentation field-flow fractionation.

Authors:  R V Sharma; R T Edwards; R Beckett
Journal:  Appl Environ Microbiol       Date:  1993-06       Impact factor: 4.792

4.  Automatic determination of bacterioplankton biomass by image analysis.

Authors:  P K Bjørnsen
Journal:  Appl Environ Microbiol       Date:  1986-06       Impact factor: 4.792

5.  Light element analysis of individual bacteria by x-ray microanalysis.

Authors:  S Norland; K M Fagerbakke; M Heldal
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

6.  Contrasting influence of soil nutrients and microbial community on differently sized basal consumers.

Authors:  J Arie Vonk; Christian Mulder
Journal:  Naturwissenschaften       Date:  2013-05-24

7.  On the relation between dry matter and volume of bacteria.

Authors:  S Norland; M Heldal; O Tumyr
Journal:  Microb Ecol       Date:  1987-03       Impact factor: 4.552

8.  Flow cytometric measurements of cell volumes and DNA contents during culture of indigenous soil bacteria.

Authors:  H Christensen; R A Olsen; L R Bakken
Journal:  Microb Ecol       Date:  1995-01       Impact factor: 4.552

9.  Effects of moisture on soil microorganisms and nematodes: A field experiment.

Authors:  J Schnürer; M Clarholm; S Boström; T Rosswall
Journal:  Microb Ecol       Date:  1986-06       Impact factor: 4.552

10.  Soil resource supply influences faunal size-specific distributions in natural food webs.

Authors:  Christian Mulder; Henri A Den Hollander; J Arie Vonk; Axel G Rossberg; Gerard A J M Jagers op Akkerhuis; Gregor W Yeates
Journal:  Naturwissenschaften       Date:  2009-05-14
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