Literature DB >> 16345807

Microcomputer-assisted biomass determination of plankton bacteria on scanning electron micrographs.

C Krambeck1, H J Krambeck, J Overbeck.   

Abstract

Although biovolume is a better measure of biomass than is cell number, biovolumes have rarely been measured because their evaluation is extremely time-consuming. We developed a microcomputer system that assists cell size measurements on images of filtered plankton: scanning electron micrograph negatives were projected on a digitizer field, bacterial length and width were marked by a cursor, and coordinates were directly transferred to an MOS 6502 microcomputer (KIM 1). The dialogue program BABI organized and controlled the digitizer measurements in cooperation with the user, enabled corrections, and printed out results with 95% confidence limits and sample description. The time for scanning electron micrograph preparation was reduced to 15 min (quick transfer to Freon 113 during filtration and air drying). Altogether, this biovolume determination took about 2.5 h for confidence limits of +/-15%. Examples are given for applications of the method: (i) comparison of 10 lakes (with specific activities for glucose uptake and for heterotrophic CO(2) fixation); (ii) ranges of biomass parameters in one lake; (iii) diurnal cycles (with synchronizing effects, uptake of algal exudates, and calculation of daily growth). This method is discussed in relation to other biomass methods (epifluorescent microscopy, lipopolysaccharide technique, frequency of dividing cells) and the problem of biovolume-to-carbon conversions.

Entities:  

Year:  1981        PMID: 16345807      PMCID: PMC243976          DOI: 10.1128/aem.42.1.142-149.1981

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  6 in total

1.  Frequency of dividing cells, a new approach to the determination of bacterial growth rates in aquatic environments.

Authors:  A Hagström; U Larsson; P Hörstedt; S Normark
Journal:  Appl Environ Microbiol       Date:  1979-05       Impact factor: 4.792

2.  Conversion of biovolume measurements of soil organisms, grown under various moisture tensions, to biomass and their nutrient content.

Authors:  J A van Veen; E A Paul
Journal:  Appl Environ Microbiol       Date:  1979-04       Impact factor: 4.792

3.  Comparison of two direct-count techniques for enumerating aquatic bacteria.

Authors:  W B Bowden
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

4.  Estimation of the volumes of bacterial cells by scanning electron microscopy.

Authors:  A Boyde; R A Williams
Journal:  Arch Oral Biol       Date:  1971-03       Impact factor: 2.633

5.  Autonomous growth fluctuations of the methane oxidizing bacterial strain M 102 in batch and continuous culture.

Authors:  C Krambeck; H J Krambeck; J Overbeck
Journal:  Arch Microbiol       Date:  1977-11-18       Impact factor: 2.552

6.  Determination of bacterial number and biomass in the marine environment.

Authors:  S W Watson; T J Novitsky; H L Quinby; F W Valois
Journal:  Appl Environ Microbiol       Date:  1977-04       Impact factor: 4.792

  6 in total
  25 in total

1.  Transient Responses of Glucose-Limited Cultures of Cytophaga johnsonae to Nutrient Excess and Starvation.

Authors:  M G Höfle
Journal:  Appl Environ Microbiol       Date:  1984-02       Impact factor: 4.792

2.  Bacterial growth in the cold: evidence for an enhanced substrate requirement.

Authors:  W J Wiebe; W M Sheldon; L R Pomeroy
Journal:  Appl Environ Microbiol       Date:  1992-01       Impact factor: 4.792

3.  Measurements of diel rates of bacterial secondary production in aquatic environments.

Authors:  B Riemann; M Søndergaard
Journal:  Appl Environ Microbiol       Date:  1984-04       Impact factor: 4.792

4.  Particle counter determination of bacterial biomass in seawater.

Authors:  K Kogure; I Koike
Journal:  Appl Environ Microbiol       Date:  1987-02       Impact factor: 4.792

5.  Annual cycle of bacterial specific biovolumes in howe sound, a canadian west coast fjord sound.

Authors:  L J Albright; S K McCrae
Journal:  Appl Environ Microbiol       Date:  1987-12       Impact factor: 4.792

6.  Assessing biomass and production of bacteria in eutrophic lake mendota, wisconsin.

Authors:  C Pedrós-Alió; T D Brock
Journal:  Appl Environ Microbiol       Date:  1982-07       Impact factor: 4.792

7.  Automatic determination of bacterioplankton biomass by image analysis.

Authors:  P K Bjørnsen
Journal:  Appl Environ Microbiol       Date:  1986-06       Impact factor: 4.792

8.  Fully automatic determination of soil bacterium numbers, cell volumes, and frequencies of dividing cells by confocal laser scanning microscopy and image analysis.

Authors:  J Bloem; M Veninga; J Shepherd
Journal:  Appl Environ Microbiol       Date:  1995-03       Impact factor: 4.792

9.  Diel changes in the specific growth rate and mean cell volume of natural bacterial communities in two different water masses in the Irish sea.

Authors:  C Turley; K Lochte
Journal:  Microb Ecol       Date:  1986-09       Impact factor: 4.552

10.  Bacterial productivity in the water column and sediments of the Georgia (USA) coastal zone: Estimates via direct counting and parallel measurement of thymidine incorporation.

Authors:  S Y Newell; R D Fallon
Journal:  Microb Ecol       Date:  1982-06       Impact factor: 4.552

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