Literature DB >> 17224040

Anticipating the 1,000 dollar genome.

Elaine R Mardis1.   

Abstract

A new generation of DNA-sequencing platforms will become commercially available over the next few years. These instruments will enable re-sequencing of human genomes at a previously unimagined throughput and low cost. Here, I examine why the 1,000 dollar human genome is an important goal for research and clinical diagnostics, and what will be required to achieve it.

Entities:  

Mesh:

Year:  2006        PMID: 17224040      PMCID: PMC1779559          DOI: 10.1186/gb-2006-7-7-112

Source DB:  PubMed          Journal:  Genome Biol        ISSN: 1474-7596            Impact factor:   13.583


  15 in total

1.  Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid.

Authors:  J D WATSON; F H CRICK
Journal:  Nature       Date:  1953-04-25       Impact factor: 49.962

Review 2.  Mutational profiling in the human genome.

Authors:  R K Wilson; T J Ley; F S Cole; J D Milbrandt; S Clifton; L Fulton; G Fewell; P Minx; H Sun; M McLellan; C Pohl; E R Mardis
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2003

3.  A sequencing method based on real-time pyrophosphate.

Authors:  M Ronaghi; M Uhlén; P Nyrén
Journal:  Science       Date:  1998-07-17       Impact factor: 47.728

4.  Real-time DNA sequencing using detection of pyrophosphate release.

Authors:  M Ronaghi; S Karamohamed; B Pettersson; M Uhlén; P Nyrén
Journal:  Anal Biochem       Date:  1996-11-01       Impact factor: 3.365

5.  A new method of sequencing DNA.

Authors:  E D Hyman
Journal:  Anal Biochem       Date:  1988-11-01       Impact factor: 3.365

6.  Spectrum of CHD7 mutations in 110 individuals with CHARGE syndrome and genotype-phenotype correlation.

Authors:  Seema R Lalani; Arsalan M Safiullah; Susan D Fernbach; Karine G Harutyunyan; Christina Thaller; Leif E Peterson; John D McPherson; Richard A Gibbs; Lisa D White; Margaret Hefner; Sandra L H Davenport; John M Graham; Carlos A Bacino; Nancy L Glass; Jeffrey A Towbin; William J Craigen; Steven R Neish; Angela E Lin; John W Belmont
Journal:  Am J Hum Genet       Date:  2005-12-29       Impact factor: 11.025

7.  Finishing the euchromatic sequence of the human genome.

Authors: 
Journal:  Nature       Date:  2004-10-21       Impact factor: 49.962

8.  EGFR mutations in lung cancer: correlation with clinical response to gefitinib therapy.

Authors:  J Guillermo Paez; Pasi A Jänne; Jeffrey C Lee; Sean Tracy; Heidi Greulich; Stacey Gabriel; Paula Herman; Frederic J Kaye; Neal Lindeman; Titus J Boggon; Katsuhiko Naoki; Hidefumi Sasaki; Yoshitaka Fujii; Michael J Eck; William R Sellers; Bruce E Johnson; Matthew Meyerson
Journal:  Science       Date:  2004-04-29       Impact factor: 47.728

9.  Identifying and characterizing a novel activating mutation of the FLT3 tyrosine kinase in AML.

Authors:  Jingrui Jiang; J Guillermo Paez; Jeffrey C Lee; Ronghai Bo; Richard M Stone; Daniel J DeAngelo; Ilene Galinsky; Brian M Wolpin; Anna Jonasova; Paula Herman; Edward A Fox; Titus J Boggon; Michael J Eck; Ellen Weisberg; James D Griffin; D Gary Gilliland; Matthew Meyerson; William R Sellers
Journal:  Blood       Date:  2004-06-03       Impact factor: 22.113

10.  A pilot study of high-throughput, sequence-based mutational profiling of primary human acute myeloid leukemia cell genomes.

Authors:  Timothy J Ley; Patrick J Minx; Matthew J Walter; Rhonda E Ries; Hui Sun; Michael McLellan; John F DiPersio; Daniel C Link; Michael H Tomasson; Timothy A Graubert; Howard McLeod; Hanna Khoury; Mark Watson; William Shannon; Kathryn Trinkaus; Sharon Heath; James W Vardiman; Michael A Caligiuri; Clara D Bloomfield; Jeffrey D Milbrandt; Elaine R Mardis; Richard K Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-12       Impact factor: 11.205

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  59 in total

1.  Gene-Lifestyle Interactions in Complex Diseases: Design and Description of the GLACIER and VIKING Studies.

Authors:  Azra Kurbasic; Alaitz Poveda; Yan Chen; Asa Agren; Elisabeth Engberg; Frank B Hu; Ingegerd Johansson; Ines Barroso; Anders Brändström; Göran Hallmans; Frida Renström; Paul W Franks
Journal:  Curr Nutr Rep       Date:  2014-12-01

2.  Ethical considerations associated with clinical use of next-generation sequencing in children.

Authors:  John D Lantos; Michael Artman; Stephen F Kingsmore
Journal:  J Pediatr       Date:  2011-12       Impact factor: 4.406

3.  New technologies for 21st century plant science.

Authors:  David W Ehrhardt; Wolf B Frommer
Journal:  Plant Cell       Date:  2012-02-24       Impact factor: 11.277

Review 4.  Measurements of spontaneous rates of mutations in the recent past and the near future.

Authors:  Fyodor A Kondrashov; Alexey S Kondrashov
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

5.  Metagenomics: Facts and Artifacts, and Computational Challenges*

Authors:  John C Wooley; Yuzhen Ye
Journal:  J Comput Sci Technol       Date:  2009-01       Impact factor: 1.571

6.  Strengths and limitations of laboratory procedures for microRNA detection.

Authors:  Jill Koshiol; Ena Wang; Yingdong Zhao; Francesco Marincola; Maria Teresa Landi
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-23       Impact factor: 4.254

7.  The Mouse Tumor Biology Database (MTB): a central electronic resource for locating and integrating mouse tumor pathology data.

Authors:  D A Begley; D M Krupke; S B Neuhauser; J E Richardson; C J Bult; J T Eppig; J P Sundberg
Journal:  Vet Pathol       Date:  2011-01-31       Impact factor: 2.221

8.  Genetic epidemiology with a capital E: where will we be in another 10 years?

Authors:  Duncan C Thomas
Journal:  Genet Epidemiol       Date:  2012-02-06       Impact factor: 2.135

9.  DNA Sudoku--harnessing high-throughput sequencing for multiplexed specimen analysis.

Authors:  Yaniv Erlich; Kenneth Chang; Assaf Gordon; Roy Ronen; Oron Navon; Michelle Rooks; Gregory J Hannon
Journal:  Genome Res       Date:  2009-05-15       Impact factor: 9.043

10.  Realistic artificial DNA sequences as negative controls for computational genomics.

Authors:  Juan Caballero; Arian F A Smit; Leroy Hood; Gustavo Glusman
Journal:  Nucleic Acids Res       Date:  2014-05-06       Impact factor: 16.971

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