Literature DB >> 16322558

Recruitment of ORC or CDC6 to DNA is sufficient to create an artificial origin of replication in mammalian cells.

David Y Takeda1, Yoshiyuki Shibata, Jeffrey D Parvin, Anindya Dutta.   

Abstract

Origins of replication are expected to recruit initiation proteins like origin recognition complex (ORC) and Cdc6 in eukaryotes and provide a platform for unwinding DNA. Here we test whether localization of initiation proteins onto DNA is sufficient for origin function. Different components of the ORC complex and Cdc6 stimulated prereplicative complex (pre-RC) formation and replication initiation when fused to the GAL4 DNA-binding domain and recruited to plasmid DNA containing a tandem array of GAL4-binding sites. Replication occurred once per cell cycle and was inhibited by Geminin, indicating that the plasmid was properly licensed during the cell cycle. The GAL4 fusion protein recruits other polypeptides of the ORC-Cdc6 complex, and nascent strand abundance was highest near the GAL4-binding sites. Therefore, the artificial origin recapitulates many of the regulatory features of physiological origins and is valuable for studies on replication initiation in mammalian cells. We demonstrated the utility of this system by showing the functional importance of the ATPase domains of human Cdc6 and Orc1 and the dispensability of the N-terminal segments of Orc1 and Orc2 in this assay. Artificial recruitment of a eukaryotic cellular replication initiation factor to a DNA sequence can create a functional origin of replication, providing a robust genetic assay for these factors and a novel approach to generating episomal vectors for gene therapy.

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Year:  2005        PMID: 16322558      PMCID: PMC1315390          DOI: 10.1101/gad.1369805

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  44 in total

1.  Structure and function of Cdc6/Cdc18: implications for origin recognition and checkpoint control.

Authors:  J Liu; C L Smith; D DeRyckere; K DeAngelis; G S Martin; J M Berger
Journal:  Mol Cell       Date:  2000-09       Impact factor: 17.970

2.  Multiple sites of replication initiation in the human beta-globin gene locus.

Authors:  S Kamath; M Leffak
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

3.  Mutational analysis of conserved sequence motifs in the budding yeast Cdc6 protein.

Authors:  A Schepers; J F Diffley
Journal:  J Mol Biol       Date:  2001-05-11       Impact factor: 5.469

4.  Architecture of the human origin recognition complex.

Authors:  S K Dhar; L Delmolino; A Dutta
Journal:  J Biol Chem       Date:  2001-06-06       Impact factor: 5.157

5.  Replication from oriP of Epstein-Barr virus requires human ORC and is inhibited by geminin.

Authors:  S K Dhar; K Yoshida; Y Machida; P Khaira; B Chaudhuri; J A Wohlschlegel; M Leffak; J Yates; A Dutta
Journal:  Cell       Date:  2001-08-10       Impact factor: 41.582

6.  Human origin recognition complex binds to the region of the latent origin of DNA replication of Epstein-Barr virus.

Authors:  A Schepers; M Ritzi; K Bousset; E Kremmer; J L Yates; J Harwood; J F Diffley; W Hammerschmidt
Journal:  EMBO J       Date:  2001-08-15       Impact factor: 11.598

7.  Inhibition of eukaryotic DNA replication by geminin binding to Cdt1.

Authors:  J A Wohlschlegel; B T Dwyer; S K Dhar; C Cvetic; J C Walter; A Dutta
Journal:  Science       Date:  2000-12-22       Impact factor: 47.728

8.  Acute reduction of an origin recognition complex (ORC) subunit in human cells reveals a requirement of ORC for Cdk2 activation.

Authors:  Yuichi J Machida; Jamie K Teer; Anindya Dutta
Journal:  J Biol Chem       Date:  2005-06-07       Impact factor: 5.157

9.  Nucleosomes positioned by ORC facilitate the initiation of DNA replication.

Authors:  J R Lipford; S P Bell
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

10.  Repression of origin assembly in metaphase depends on inhibition of RLF-B/Cdt1 by geminin.

Authors:  S Tada; A Li; D Maiorano; M Méchali; J J Blow
Journal:  Nat Cell Biol       Date:  2001-02       Impact factor: 28.824

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  41 in total

1.  The LMO2 oncogene regulates DNA replication in hematopoietic cells.

Authors:  Marie-Claude Sincennes; Magali Humbert; Benoît Grondin; Véronique Lisi; Diogo F T Veiga; André Haman; Christophe Cazaux; Nazar Mashtalir; El Bachir Affar; Alain Verreault; Trang Hoang
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-13       Impact factor: 11.205

2.  ORC binding to TRF2 stimulates OriP replication.

Authors:  Constandache Atanasiu; Zhong Deng; Andreas Wiedmer; Julie Norseen; Paul M Lieberman
Journal:  EMBO Rep       Date:  2006-06-16       Impact factor: 8.807

3.  Binding of AlF-C, an Orc1-binding transcriptional regulator, enhances replicator activity of the rat aldolase B origin.

Authors:  Hiroyuki Minami; Junko Takahashi; Asami Suto; Yasushi Saitoh; Ken-ichi Tsutsumi
Journal:  Mol Cell Biol       Date:  2006-09-18       Impact factor: 4.272

4.  Interaction between HMGA1a and the origin recognition complex creates site-specific replication origins.

Authors:  Andreas W Thomae; Dagmar Pich; Jan Brocher; Mark-Peter Spindler; Christian Berens; Robert Hock; Wolfgang Hammerschmidt; Aloys Schepers
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-30       Impact factor: 11.205

5.  Molecular evolution of Drosophila Cdc6, an essential DNA replication-licensing gene, suggests an adaptive choice of replication origins.

Authors:  Benjamin L Wiggins; Harmit S Malik
Journal:  Fly (Austin)       Date:  2007 May-Jun       Impact factor: 2.160

6.  RNA-dependent recruitment of the origin recognition complex.

Authors:  Julie Norseen; Andreas Thomae; Venkatesh Sridharan; Ashok Aiyar; Aloys Schepers; Paul M Lieberman
Journal:  EMBO J       Date:  2008-10-23       Impact factor: 11.598

7.  Epstein-Barr nuclear antigen 1 (EBNA1)-dependent recruitment of origin recognition complex (Orc) on oriP of Epstein-Barr virus with purified proteins: stimulation by Cdc6 through its direct interaction with EBNA1.

Authors:  Kenji Moriyama; Naoko Yoshizawa-Sugata; Chikashi Obuse; Toshiki Tsurimoto; Hisao Masai
Journal:  J Biol Chem       Date:  2012-05-14       Impact factor: 5.157

Review 8.  Regulating DNA replication in eukarya.

Authors:  Khalid Siddiqui; Kin Fan On; John F X Diffley
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-09-01       Impact factor: 10.005

9.  Post-licensing Specification of Eukaryotic Replication Origins by Facilitated Mcm2-7 Sliding along DNA.

Authors:  Julien Gros; Charanya Kumar; Gerard Lynch; Tejas Yadav; Iestyn Whitehouse; Dirk Remus
Journal:  Mol Cell       Date:  2015-11-19       Impact factor: 17.970

Review 10.  A surrogate approach to study the evolution of noncoding DNA elements that organize eukaryotic genomes.

Authors:  Danielle Vermaak; Joshua J Bayes; Harmit S Malik
Journal:  J Hered       Date:  2009-07-27       Impact factor: 2.645

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