Literature DB >> 1631094

Crystal structure of rat liver dihydropteridine reductase.

K I Varughese1, M M Skinner, J M Whiteley, D A Matthews, N H Xuong.   

Abstract

The structure of a binary complex of dihydropteridine reductase [DHPR; NAD(P)H:6,7-dihydropteridine oxidoreductase, EC 1.6.99.7] with its cofactor, NADH, has been solved and refined to a final R factor of 15.4% by using 2.3 A diffraction data. DHPR is an alpha/beta protein with a Rossmann-type dinucleotide fold for NADH binding. Insertion of an extra threonine residue in the human enzyme is associated with severe symptoms of a variant form of phenylketonuria and maps to a tightly linked sequence of secondary-structural elements near the dimer interface. Dimerization is mediated by a four-helix bundle motif (two helices from each protomer) having an unusual right-handed twist. DHPR is structurally and mechanistically distinct from dihydrofolate reductase, appearing to more closely resemble certain nicotinamide dinucleotide-requiring flavin-dependent enzymes, such as glutathione reductase.

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Year:  1992        PMID: 1631094      PMCID: PMC49441          DOI: 10.1073/pnas.89.13.6080

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

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Authors:  S Kaufman; N A Holtzman; S Milstien; L J Butler; A Krumholz
Journal:  N Engl J Med       Date:  1975-10-16       Impact factor: 91.245

2.  Crystallographic R factor refinement by molecular dynamics.

Authors:  A T Brünger; J Kuriyan; M Karplus
Journal:  Science       Date:  1987-01-23       Impact factor: 47.728

3.  Insertion of an extra codon for threonine is a cause of dihydropteridine reductase deficiency.

Authors:  D W Howells; S M Forrest; H H Dahl; R G Cotton
Journal:  Am J Hum Genet       Date:  1990-08       Impact factor: 11.025

4.  Topological distribution of four-alpha-helix bundles.

Authors:  S R Presnell; F E Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

5.  Structure of the detoxification catalyst mercuric ion reductase from Bacillus sp. strain RC607.

Authors:  N Schiering; W Kabsch; M J Moore; M D Distefano; C T Walsh; E F Pai
Journal:  Nature       Date:  1991-07-11       Impact factor: 49.962

6.  Structure and expression of human dihydropteridine reductase.

Authors:  J Lockyer; R G Cook; S Milstien; S Kaufman; S L Woo; F D Ledley
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

7.  Substrate binding and catalysis by glutathione reductase as derived from refined enzyme: substrate crystal structures at 2 A resolution.

Authors:  P A Karplus; G E Schulz
Journal:  J Mol Biol       Date:  1989-11-05       Impact factor: 5.469

8.  Hydrogen transfer from 4-R and 4-S (4-3H) NADH in the reduction of d,l-cis-6,7-dimethyl-6,7 (8H) dihydropterin with dihydropteridine reductase from human liver and sheep liver.

Authors:  W L Armarego
Journal:  Biochem Biophys Res Commun       Date:  1979-07-12       Impact factor: 3.575

9.  Atomic structure of ferredoxin-NADP+ reductase: prototype for a structurally novel flavoenzyme family.

Authors:  P A Karplus; M J Daniels; J R Herriott
Journal:  Science       Date:  1991-01-04       Impact factor: 47.728

Review 10.  Stereospecificity for nicotinamide nucleotides in enzymatic and chemical hydride transfer reactions.

Authors:  K S You
Journal:  CRC Crit Rev Biochem       Date:  1985
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  31 in total

1.  Genotype-phenotype correlation in dihydropteridine reductase deficiency.

Authors:  L de Sanctis; C Alliaudi; M Spada; R Farrugia; R Cerone; G Biasucci; C Meli; E Zammarchi; T Coskun; N Blau; A Ponzone; I Dianzani
Journal:  J Inherit Metab Dis       Date:  2000-06       Impact factor: 4.982

2.  Localization of binding sites in protein structures by optimization of a composite scoring function.

Authors:  Andrea Rossi; Marc A Marti-Renom; Andrej Sali
Journal:  Protein Sci       Date:  2006-09-08       Impact factor: 6.725

3.  A novel 17beta-hydroxysteroid dehydrogenase in the fungus Cochliobolus lunatus: new insights into the evolution of steroid-hormone signalling.

Authors:  T Lanisnik Rizner; G Moeller; H H Thole; M Zakelj-Mavric; J Adamski
Journal:  Biochem J       Date:  1999-02-01       Impact factor: 3.857

4.  Molecular analysis of 16 Turkish families with DHPR deficiency using denaturing gradient gel electrophoresis (DGGE).

Authors:  A Romstad; H S Kalkanoğlu; T Coşkun; M Demirkol; A Tokatli; A Dursun; T Baykal; I Ozalp; P Guldberg; F Güttler
Journal:  Hum Genet       Date:  2000-12       Impact factor: 4.132

5.  QDPR gene mutation and clinical follow-up in Chinese patients with dihydropteridine reductase deficiency.

Authors:  De-Yun Lu; Jun Ye; Lian-Shu Han; Wen-Juan Qiu; Hui-Wen Zhang; Jian-De Zhou; Pei-Zhong Bao; Ya-Fen Zhang; Xue-Fan Gu
Journal:  World J Pediatr       Date:  2014-08-15       Impact factor: 2.764

6.  An NADPH-dependent Lactobacillus composti short-chain dehydrogenase/reductase: characterization and application to (R)-1-phenylethanol synthesis.

Authors:  Ya-Jun Wang; Bin-Bin Ying; Min Chen; Wei Shen; Zhi-Qiang Liu; Yu-Guo Zheng
Journal:  World J Microbiol Biotechnol       Date:  2017-06-16       Impact factor: 3.312

7.  High-resolution structures of the bifunctional enzyme and transcriptional coactivator DCoH and its complex with a product analogue.

Authors:  J D Cronk; J A Endrizzi; T Alber
Journal:  Protein Sci       Date:  1996-10       Impact factor: 6.725

8.  Crystallization and preliminary characterization of dihydropteridine reductase from Dictyostelium discoideum.

Authors:  Cong Chen; Kyung Hye Seo; Hye Lim Kim; Ningning Zhuang; Young Shik Park; Kon Ho Lee
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-10-25

9.  Structural and mechanistic characteristics of dihydropteridine reductase: a member of the Tyr-(Xaa)3-Lys-containing family of reductases and dehydrogenases.

Authors:  K I Varughese; N H Xuong; P M Kiefer; D A Matthews; J M Whiteley
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

Review 10.  Medium- and short-chain dehydrogenase/reductase gene and protein families : the SDR superfamily: functional and structural diversity within a family of metabolic and regulatory enzymes.

Authors:  K L Kavanagh; H Jörnvall; B Persson; U Oppermann
Journal:  Cell Mol Life Sci       Date:  2008-12       Impact factor: 9.261

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