Literature DB >> 8897596

High-resolution structures of the bifunctional enzyme and transcriptional coactivator DCoH and its complex with a product analogue.

J D Cronk1, J A Endrizzi, T Alber.   

Abstract

DCoH, the dimerization cofactor of hepatocyte nuclear factor 1 (HNF-1), functions as both a transcriptional coactivator and a pterin dehydratase. To probe the relationship between these two functions, the X-ray crystal structures of the free enzyme and its complex with the product analogue 7,8-dihydrobiopterin were refined at 2.3 A resolution. The ligand binds at four sites per tetrameric enzyme, with little apparent conformational change in the protein. Each active-site cleft is located in a subunit interface, adjacent to a prominent saddle motif that has structural similarities to the TATA binding protein. The pterin binds within an arch of aromatic residues that extends across one dimer interface. The bound ligand makes contacts to three conserved histidines, and this arrangement restricts proposals for the enzymatic mechanism of dehydration. The dihedral symmetry of DCoH suggests that binding to the dimerization domain of HNF-1 likely involves the superposition of two-fold rotation axes of the two proteins.

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Year:  1996        PMID: 8897596      PMCID: PMC2143270          DOI: 10.1002/pro.5560051002

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  30 in total

Review 1.  The GTPase superfamily: conserved structure and molecular mechanism.

Authors:  H R Bourne; D A Sanders; F McCormick
Journal:  Nature       Date:  1991-01-10       Impact factor: 49.962

2.  Circular dichroism study on the conformational stability of the dimerization domain of transcription factor LFB1.

Authors:  R De Francesco; A Pastore; G Vecchio; R Cortese
Journal:  Biochemistry       Date:  1991-01-08       Impact factor: 3.162

3.  A myosin-like dimerization helix and an extra-large homeodomain are essential elements of the tripartite DNA binding structure of LFB1.

Authors:  A Nicosia; P Monaci; L Tomei; R De Francesco; M Nuzzo; H Stunnenberg; R Cortese
Journal:  Cell       Date:  1990-06-29       Impact factor: 41.582

4.  Purification and characterization of phenylalanine hydroxylase-stimulating protein from rat liver.

Authors:  C Y Huang; E E Max; S Kaufman
Journal:  J Biol Chem       Date:  1973-06-25       Impact factor: 5.157

5.  Studies on the mechanisms of action of phenylalanine hydroxylase and its protein stimulator. I. Enzyme concentration dependence of the specific activity of phenylalanine hydroxylase due to a nonenzymatic step.

Authors:  C Y Huang; S Kaufman
Journal:  J Biol Chem       Date:  1973-06-25       Impact factor: 5.157

6.  7-Substituted pterins: formation during phenylalanine hydroxylation in the absence of dehydratase.

Authors:  H C Curtius; C Adler; I Rebrin; C Heizmann; S Ghisla
Journal:  Biochem Biophys Res Commun       Date:  1990-11-15       Impact factor: 3.575

7.  Crystal structure of rat liver dihydropteridine reductase.

Authors:  K I Varughese; M M Skinner; J M Whiteley; D A Matthews; N H Xuong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-01       Impact factor: 11.205

8.  Characterization of a cofactor that regulates dimerization of a mammalian homeodomain protein.

Authors:  D B Mendel; P A Khavari; P B Conley; M K Graves; L P Hansen; A Admon; G R Crabtree
Journal:  Science       Date:  1991-12-20       Impact factor: 47.728

9.  Conversion of 6-substituted tetrahydropterins to 7-isomers via phenylalanine hydroxylase-generated intermediates.

Authors:  M D Davis; S Kaufman; S Milstien
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-15       Impact factor: 11.205

Review 10.  PCD/DCoH: more than a second molecular saddle.

Authors:  J L Kim; S K Burley
Journal:  Structure       Date:  1995-06-15       Impact factor: 5.006

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  8 in total

Review 1.  Allosteric regulation of phenylalanine hydroxylase.

Authors:  Paul F Fitzpatrick
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Journal:  Plant Physiol       Date:  2008-02-01       Impact factor: 8.340

3.  Structure and identification of a pterin dehydratase-like protein as a ribulose-bisphosphate carboxylase/oxygenase (RuBisCO) assembly factor in the α-carboxysome.

Authors:  Nicole M Wheatley; Christopher D Sundberg; Soheil D Gidaniyan; Duilio Cascio; Todd O Yeates
Journal:  J Biol Chem       Date:  2014-01-23       Impact factor: 5.157

4.  Functional identification of orthologous genes encoding pterin recycling activity in Plasmodium falciparum and Toxoplasma gondii.

Authors:  Qi Wang; Vicia Hauser; Martin Read; Ping Wang; Andrew D Hanson; Paul F G Sims; John E Hyde
Journal:  Mol Biochem Parasitol       Date:  2005-11-28       Impact factor: 1.759

Review 5.  Tetrahydrobiopterin biosynthesis, regeneration and functions.

Authors:  B Thöny; G Auerbach; N Blau
Journal:  Biochem J       Date:  2000-04-01       Impact factor: 3.857

6.  Studies on the enzymatic and transcriptional activity of the dimerization cofactor for hepatocyte nuclear factor 1.

Authors:  G Johnen; S Kaufman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

7.  Diabetes-associated mutations in a beta-cell transcription factor destabilize an antiparallel "mini-zipper" in a dimerization interface.

Authors:  Q X Hua; M Zhao; N Narayana; S H Nakagawa; W Jia; M A Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

8.  Solution NMR structures of proteins VPA0419 from Vibrio parahaemolyticus and yiiS from Shigella flexneri provide structural coverage for protein domain family PFAM 04175.

Authors:  Kiran Kumar Singarapu; Jeffrey L Mills; Rong Xiao; Thomas Acton; Marco Punta; Markus Fischer; Barry Honig; Burkhard Rost; Gaetano T Montelione; Thomas Szyperski
Journal:  Proteins       Date:  2010-02-15
  8 in total

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