Literature DB >> 16286247

Integrative genomic and proteomic analysis of prostate cancer reveals signatures of metastatic progression.

Sooryanarayana Varambally1, Jianjun Yu, Bharathi Laxman, Daniel R Rhodes, Rohit Mehra, Scott A Tomlins, Rajal B Shah, Uma Chandran, Federico A Monzon, Michael J Becich, John T Wei, Kenneth J Pienta, Debashis Ghosh, Mark A Rubin, Arul M Chinnaiyan.   

Abstract

Molecular profiling of cancer at the transcript level has become routine. Large-scale analysis of proteomic alterations during cancer progression has been a more daunting task. Here, we employed high-throughput immunoblotting in order to interrogate tissue extracts derived from prostate cancer. We identified 64 proteins that were altered in prostate cancer relative to benign prostate and 156 additional proteins that were altered in metastatic disease. An integrative analysis of this compendium of proteomic alterations and transcriptomic data was performed, revealing only 48%-64% concordance between protein and transcript levels. Importantly, differential proteomic alterations between metastatic and clinically localized prostate cancer that mapped concordantly to gene transcripts served as predictors of clinical outcome in prostate cancer as well as other solid tumors.

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Year:  2005        PMID: 16286247     DOI: 10.1016/j.ccr.2005.10.001

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  392 in total

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Journal:  Cancer Res       Date:  2010-11-22       Impact factor: 12.701

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Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

Review 4.  Integration of proteomics into systems biology of cancer.

Authors:  S Hanash; M Schliekelman; Q Zhang; A Taguchi
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2012-03-08

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Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-02       Impact factor: 11.205

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Journal:  Clin Cancer Res       Date:  2010-06-04       Impact factor: 12.531

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Journal:  Mol Cancer Res       Date:  2013-02-05       Impact factor: 5.852

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9.  CARM1 methylates chromatin remodeling factor BAF155 to enhance tumor progression and metastasis.

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Journal:  Cancer Cell       Date:  2014-01-13       Impact factor: 31.743

10.  Serine protease HtrA1 as an inhibitor on proliferation invasion and migration of gastric cancer.

Authors:  Zhiguo Zhao; Huifang Li; Chuanyi Wang; Wanfang Xu; Junfeng Sun; Wenzhao Zhao
Journal:  Med Oncol       Date:  2015-03-12       Impact factor: 3.064

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