Literature DB >> 16282168

Nodes in phylogenetic trees: the relation between imbalance and number of descendent species.

Eric W Holman1.   

Abstract

The imbalance of a node in a phylogenetic tree can be defined in terms of the relative numbers of species (or higher taxa) on the branches that originate at the node. Empirically, imbalance also turns out to depend on the absolute total number of species on the branches: in a sample of large trees, nodes with more descendent species tend to be more unbalanced. Subsidiary analyses suggest that this pattern is not a result of errors in tree estimation. Instead, the increase in imbalance with species is consistent with a cumulative effect of differences in diversification rates between branches. [Equal-rates Markov model; imbalance; phylogeny shape; proportional-to-distinguishable-arrangements model.].

Mesh:

Year:  2005        PMID: 16282168     DOI: 10.1080/10635150500354696

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


  4 in total

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Journal:  Genetics       Date:  2017-12-07       Impact factor: 4.562

2.  The shape of mammalian phylogeny: patterns, processes and scales.

Authors:  Andy Purvis; Susanne A Fritz; Jesús Rodríguez; Paul H Harvey; Richard Grenyer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-09-12       Impact factor: 6.237

3.  The tree balance signature of mass extinction is erased by continued evolution in clades of constrained size with trait-dependent speciation.

Authors:  Guan-Dong Yang; Paul-Michael Agapow; Gabriel Yedid
Journal:  PLoS One       Date:  2017-06-23       Impact factor: 3.240

4.  Universal scaling in the branching of the tree of life.

Authors:  E Alejandro Herrada; Claudio J Tessone; Konstantin Klemm; Víctor M Eguíluz; Emilio Hernández-García; Carlos M Duarte
Journal:  PLoS One       Date:  2008-07-23       Impact factor: 3.240

  4 in total

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