Literature DB >> 16272466

Rapid detection of Mycobacterium tuberculosis in respiratory samples by transcription-reverse transcription concerted reaction with an automated system.

Shunji Takakura1, Shigeo Tsuchiya, Yuichi Isawa, Kiyoshi Yasukawa, Toshinori Hayashi, Motohisa Tomita, Katsuhiro Suzuki, Tatsuro Hasegawa, Takanori Tagami, Atsuyuki Kurashima, Satoshi Ichiyama.   

Abstract

The aim of this study was to evaluate the performance of the transcription-reverse transcription concerted (TRC) method for the detection of Mycobacterium tuberculosis complex (MTC) 16S rRNA in clinical respiratory samples for the diagnosis of pulmonary tuberculosis. TRC is a novel method that enables the rapid and the completely homogeneous real-time monitoring of isothermal sequence RNA amplification without any postamplification procedure. The detection limit of the TRC method for MTC was one organism per 100 mul of sputum. The specificity of the method was confirmed by the absence of positive signals for sputum containing 10(6) M. avium or M. kansasii organisms per 100 microl. A total of 201 respiratory samples from patients diagnosed with or suspected of having tuberculosis were tested. Of the 72 MTC culture-positive samples, the TRC method was positive for 52 (sensitivity, 72.2%), whereas the Roche COBAS AMPLICOR PCR was positive for 58 (sensitivity, 80.6%). Both the TRC method and the COBAS AMPLICOR PCR showed no positive identification for any of the 129 culture-negative samples. The percent agreement between the two methods was 95% (191 of 201 samples). The high sensitivity and specificity together with shorter detection time (within 1 h) of the TRC method allow it to be proposed as a useful method for the rapid detection of MTC in respiratory samples.

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Year:  2005        PMID: 16272466      PMCID: PMC1287819          DOI: 10.1128/JCM.43.11.5435-5439.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  16 in total

Review 1.  Relevance of commercial amplification methods for direct detection of Mycobacterium tuberculosis complex in clinical samples.

Authors:  Claudio Piersimoni; Claudio Scarparo
Journal:  J Clin Microbiol       Date:  2003-12       Impact factor: 5.948

2.  Comparison of the BDProbeTec ET system with the Cobas Amplicor PCR for direct detection of Mycobacterium tuberculosis in respiratory samples.

Authors:  Y Iinuma; K Senda; N Fujihara; T Saito; S Takakura; M Shimojima; T Kudo; S Ichiyama
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2003-05-16       Impact factor: 3.267

3.  Rapid and specific detection of tdh, trh1, and trh2 mRNA of Vibrio parahaemolyticus by transcription-reverse transcription concerted reaction with an automated system.

Authors:  Yoshitsugu Nakaguchi; Tetsuya Ishizuka; Satoru Ohnaka; Toshinori Hayashi; Kiyoshi Yasukawa; Takahiko Ishiguro; Mitsuaki Nishibuchi
Journal:  J Clin Microbiol       Date:  2004-09       Impact factor: 5.948

4.  Isothermal RNA sequence amplification method for rapid antituberculosis drug susceptibility testing of Mycobacterium tuberculosis.

Authors:  Shunji Takakura; Shigeo Tsuchiya; Naoko Fujihara; Toyoichiro Kudo; Yoshitsugu Iinuma; Satoshi Mitarai; Satoshi Ichiyama; Kiyoshi Yasukawa; Takahiko Ishiguro
Journal:  J Clin Microbiol       Date:  2005-05       Impact factor: 5.948

5.  Performance assessment of two commercial amplification assays for direct detection of Mycobacterium tuberculosis complex from respiratory and extrapulmonary specimens.

Authors:  Claudio Piersimoni; Claudio Scarparo; Paola Piccoli; Alessandra Rigon; Giuliana Ruggiero; Domenico Nista; Stefano Bornigia
Journal:  J Clin Microbiol       Date:  2002-11       Impact factor: 5.948

6.  Evaluation of the Gen-Probe amplified Mycobacterium tuberculosis direct test for the routine diagnosis of pulmonary tuberculosis.

Authors:  F Portaels; E Serruys; H De Beenhouwer; J Degraux; K De Ridder; K Fissette; J Gomez-Marin; H Goossens; F Mühlberger; S R Pattyn; F Nturanye; F Pouthier; A Van Deun
Journal:  Acta Clin Belg       Date:  1996       Impact factor: 1.264

7.  Evaluation of Gen-Probe Amplified Mycobacterium Tuberculosis Direct Test and Roche PCR-microwell plate hybridization method (AMPLICOR MYCOBACTERIUM) for direct detection of mycobacteria.

Authors:  S Ichiyama; Y Iinuma; Y Tawada; S Yamori; Y Hasegawa; K Shimokata; N Nakashima
Journal:  J Clin Microbiol       Date:  1996-01       Impact factor: 5.948

8.  Amplification of rRNA for assessment of treatment response of pulmonary tuberculosis patients during antimicrobial therapy.

Authors:  D F Moore; J I Curry; C A Knott; V Jonas
Journal:  J Clin Microbiol       Date:  1996-07       Impact factor: 5.948

9.  Assessment by meta-analysis of PCR for diagnosis of smear-negative pulmonary tuberculosis.

Authors:  Olga L Sarmiento; Kristen A Weigle; Janet Alexander; David J Weber; William C Miller
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

10.  Homogeneous quantitative assay of hepatitis C virus RNA by polymerase chain reaction in the presence of a fluorescent intercalater.

Authors:  T Ishiguro; J Saitoh; H Yawata; H Yamagishi; S Iwasaki; Y Mitoma
Journal:  Anal Biochem       Date:  1995-08-10       Impact factor: 3.365

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  10 in total

1.  Development of a transcription-reverse transcription concerted reaction method for specific detection of human enterovirus 71 from clinical specimens.

Authors:  Naoto Nakajima; Yuka Kitamori; Satoru Ohnaka; Yasutami Mitoma; Katsumi Mizuta; Takaji Wakita; Hiroyuki Shimizu; Minetaro Arita
Journal:  J Clin Microbiol       Date:  2012-02-22       Impact factor: 5.948

2.  Is real-time PCR better than conventional PCR for Mycobacterium tuberculosis complex detection in clinical samples?

Authors:  Enrico Tortoli; Pasquale Urbano; Fiorella Marcelli; Tullia M Simonetti; Daniela M Cirillo
Journal:  J Clin Microbiol       Date:  2012-06-12       Impact factor: 5.948

3.  Establishment of a new method, transcription-reverse transcription concerted reaction, for detection of plasma hnRNP B1 mRNA, a biomarker of lung cancer.

Authors:  Akemi Sato; Naoko Sueoka-Aragane; Juichi Saitoh; Kazutoshi Komiya; Takashi Hisatomi; Rika Tomimasu; Shinichiro Hayashi; Eisaburo Sueoka
Journal:  J Cancer Res Clin Oncol       Date:  2008-05-07       Impact factor: 4.553

4.  Comprehensive multicenter evaluation of a new line probe assay kit for identification of Mycobacterium species and detection of drug-resistant Mycobacterium tuberculosis.

Authors:  Satoshi Mitarai; Seiya Kato; Hideo Ogata; Akio Aono; Kinuyo Chikamatsu; Kazue Mizuno; Emiko Toyota; Akiko Sejimo; Katsuhiro Suzuki; Shiomi Yoshida; Takefumi Saito; Ataru Moriya; Akira Fujita; Shuko Sato; Tomoshige Matsumoto; Hiromi Ano; Toshinori Suetake; Yuji Kondo; Teruo Kirikae; Toru Mori
Journal:  J Clin Microbiol       Date:  2012-01-11       Impact factor: 5.948

5.  Rapid detection of the Mycobacterium tuberculosis complex by use of quenching probe PCR (geneCube).

Authors:  Yukio Hida; Kyoko Hisada; Akihiro Shimada; Masanori Yamashita; Hideki Kimura; Haruyoshi Yoshida; Hiromichi Iwasaki; Masayuki Iwano
Journal:  J Clin Microbiol       Date:  2012-08-29       Impact factor: 5.948

6.  Clinical evaluation of TRCRapid M.TB for detection of Mycobacterium tuberculosis complex in respiratory and nonrespiratory specimens.

Authors:  Haruka Tanaka; Haruka Hirose; Yuko Kato; Saori Kida; Eiji Miyajima
Journal:  J Clin Microbiol       Date:  2010-03-03       Impact factor: 5.948

7.  Carcinoembryonic antigen-producing multiple myeloma detected by a transcription-reverse transcription concerted reaction system.

Authors:  Ken Kaito; Hiroko Otsubo; Shinobu Takahara; Miyuki Hyouki; Masaki Abe; Ikurou Abe; Noriko Usui
Journal:  Int J Hematol       Date:  2007-02       Impact factor: 2.490

8.  Multicenter evaluation of a transcription-reverse transcription concerted assay for rapid detection of mycobacterium tuberculosis complex in clinical specimens.

Authors:  V Drouillon; G Delogu; G Dettori; P H Lagrange; M Benecchi; F Houriez; K Baroli; F Ardito; R Torelli; C Chezzi; G Fadda; J-L Herrmann
Journal:  J Clin Microbiol       Date:  2009-09-09       Impact factor: 5.948

9.  Disseminated Tuberculosis with Cholecystitis in a Patient after Cord Blood Transplantation.

Authors:  Takaaki Konuma; Masamichi Isobe; Eisuke Adachi; Seiko Kato; Satoshi Takahashi; Hiroshi Yotsuyanagi; Arinobu Tojo
Journal:  Intern Med       Date:  2020-07-14       Impact factor: 1.271

10.  Commercial nucleic-acid amplification tests for diagnosis of pulmonary tuberculosis in respiratory specimens: meta-analysis and meta-regression.

Authors:  Daphne I Ling; Laura L Flores; Lee W Riley; Madhukar Pai
Journal:  PLoS One       Date:  2008-02-06       Impact factor: 3.240

  10 in total

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