Literature DB >> 15365024

Rapid and specific detection of tdh, trh1, and trh2 mRNA of Vibrio parahaemolyticus by transcription-reverse transcription concerted reaction with an automated system.

Yoshitsugu Nakaguchi1, Tetsuya Ishizuka, Satoru Ohnaka, Toshinori Hayashi, Kiyoshi Yasukawa, Takahiko Ishiguro, Mitsuaki Nishibuchi.   

Abstract

Vibrio parahaemolyticus strains carrying the thermostable direct hemolysin (TDH) tdh gene, the TDH-related hemolysin (trh) gene, or both genes are considered virulent strains. We previously demonstrated that the transcription-reverse transcription concerted (TRC) method could be used to quantify the amount of mRNA transcribed from the tdh gene by using an automated detection system. In this study, we devised two TRC-based assays to quantify the mRNAs transcribed from the trh1 and trh2 genes, the two representative trh genes. The TRC-based detection assays for the tdh, trh1, and trh2 transcripts could specifically and quantitatively detect 10(3) to 10(7) copies of the corresponding calibrator RNAs. We examined by the three TRC assays the total RNA preparations extracted from 103 strains of Vibrio parahaemolyticus carrying the tdh, trh1, or trh2 gene in various combinations. The tdh, trh1, and trh2 mRNAs in the total RNA preparations were specifically quantified, and the time needed for detection ranged from 9 to 19 min, from 14 to 18 min, and from 9 to 12 min, respectively. The results showed that this automated TRC assays could detect the tdh, trh1, and trh2 mRNAs specifically, quantitatively, and rapidly. The relative levels of TDH determined by the immunological method and that of tdh mRNA determined by the TRC assays for most tdh-positive strains correlated. Interestingly, the levels of TDH produced from the strains carrying both tdh and trh genes were lower than those carrying only the tdh gene, whereas the levels of mRNA did not significantly differ between the two groups.

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Year:  2004        PMID: 15365024      PMCID: PMC516370          DOI: 10.1128/JCM.42.9.4284-4292.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  34 in total

1.  Intercalation activating fluorescence DNA probe and its application to homogeneous quantification of a target sequence by isothermal sequence amplification in a closed vessel.

Authors:  Takahiko Ishiguro; Juichi Saitoh; Ryuichi Horie; Toshinori Hayashi; Tetsuya Ishizuka; Shigeo Tsuchiya; Kiyoshi Yasukawa; Takahiro Kido; Yoshitsugu Nakaguchi; Mitsuaki Nishibuchi; Kunihiro Ueda
Journal:  Anal Biochem       Date:  2003-03-01       Impact factor: 3.365

2.  Emergence of a restricted bioserovar of Vibrio parahaemolyticus as the predominant cause of Vibrio-associated gastroenteritis on the West Coast of the United States and Mexico.

Authors:  S L Abbott; C Powers; C A Kaysner; Y Takeda; M Ishibashi; S W Joseph; J M Janda
Journal:  J Clin Microbiol       Date:  1989-12       Impact factor: 5.948

3.  Duplication and variation of the thermostable direct haemolysin (tdh) gene in Vibrio parahaemolyticus.

Authors:  M Nishibuchi; J B Kaper
Journal:  Mol Microbiol       Date:  1990-01       Impact factor: 3.501

4.  Cloning and nucleotide sequence of the gene (trh) encoding the hemolysin related to the thermostable direct hemolysin of Vibrio parahaemolyticus.

Authors:  M Nishibuchi; T Taniguchi; T Misawa; V Khaeomanee-Iam; T Honda; T Miwatani
Journal:  Infect Immun       Date:  1989-09       Impact factor: 3.441

5.  Gastroenteritis due to Kanagawa negative Vibrio parahaemolyticus.

Authors:  S Hondo; I Goto; I Minematsu; N Ikeda; N Asano; M Ishibashi; Y Kinoshita; N Nishibuchi; T Honda; T Miwatani
Journal:  Lancet       Date:  1987-02-07       Impact factor: 79.321

6.  Molecular epidemiologic evidence for association of thermostable direct hemolysin (TDH) and TDH-related hemolysin of Vibrio parahaemolyticus with gastroenteritis.

Authors:  H Shirai; H Ito; T Hirayama; Y Nakamoto; N Nakabayashi; K Kumagai; Y Takeda; M Nishibuchi
Journal:  Infect Immun       Date:  1990-11       Impact factor: 3.441

7.  Emergence of a unique O3:K6 clone of Vibrio parahaemolyticus in Calcutta, India, and isolation of strains from the same clonal group from Southeast Asian travelers arriving in Japan.

Authors:  J Okuda; M Ishibashi; E Hayakawa; T Nishino; Y Takeda; A K Mukhopadhyay; S Garg; S K Bhattacharya; G B Nair; M Nishibuchi
Journal:  J Clin Microbiol       Date:  1997-12       Impact factor: 5.948

8.  Urease-positive, Kanagawa-negative Vibrio parahaemolyticus from patients and the environment in the Pacific Northwest.

Authors:  M T Kelly; E M Stroh
Journal:  J Clin Microbiol       Date:  1989-12       Impact factor: 5.948

9.  The urease gene cluster of Vibrio parahaemolyticus does not influence the expression of the thermostable direct hemolysin (TDH) gene or the TDH-related hemolysin gene.

Authors:  Yoshitsugu Nakaguchi; Jun Okuda; Tetsuya Iida; Mitsuaki Nishibuchi
Journal:  Microbiol Immunol       Date:  2003       Impact factor: 1.955

10.  Clinical, epidemiological, and socioeconomic analysis of an outbreak of Vibrio parahaemolyticus in Khanh Hoa Province, Vietnam.

Authors:  Dinh Thi Tuyet; Vu Dinh Thiem; Lorenz Von Seidlein; Ashrafazzuman Chowdhury; Eunsik Park; Do Gia Canh; Bui Trong Chien; Tran Van Tung; Abdollah Naficy; Malla Raghav Rao; Mohammad Ali; Hyejon Lee; Trinh Hung Sy; Mitsuaki Nichibuchi; John Clemens; Dang Duc Trach
Journal:  J Infect Dis       Date:  2002-11-11       Impact factor: 5.226

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  3 in total

1.  Rapid detection of Mycobacterium tuberculosis in respiratory samples by transcription-reverse transcription concerted reaction with an automated system.

Authors:  Shunji Takakura; Shigeo Tsuchiya; Yuichi Isawa; Kiyoshi Yasukawa; Toshinori Hayashi; Motohisa Tomita; Katsuhiro Suzuki; Tatsuro Hasegawa; Takanori Tagami; Atsuyuki Kurashima; Satoshi Ichiyama
Journal:  J Clin Microbiol       Date:  2005-11       Impact factor: 5.948

2.  Carcinoembryonic antigen-producing multiple myeloma detected by a transcription-reverse transcription concerted reaction system.

Authors:  Ken Kaito; Hiroko Otsubo; Shinobu Takahara; Miyuki Hyouki; Masaki Abe; Ikurou Abe; Noriko Usui
Journal:  Int J Hematol       Date:  2007-02       Impact factor: 2.490

3.  Molecular epidemiology and genetic variation of pathogenic Vibrio parahaemolyticus in Peru.

Authors:  Ronnie G Gavilan; Maria L Zamudio; Jaime Martinez-Urtaza
Journal:  PLoS Negl Trop Dis       Date:  2013-05-16
  3 in total

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