Literature DB >> 16248623

ZiCo: a peptide designed to switch folded state upon binding zinc.

Eleonora Cerasoli1, Belinda K Sharpe, Derek N Woolfson.   

Abstract

We describe a novel approach to the design of a metal-triggered conformational switch. Specifically, two distinct protein-folding motifs were merged into one polypeptide sequence. The target structures were an alpha-helical coiled-coil trimer and zinc-bound monomer. Solution-phase spectroscopic, sedimentation, and binding studies confirmed the key aspects of the design. Both forms of the peptide were cooperatively folded, and the switch between them was reversible. This design process potentially presents a novel route to peptide-based biosensors.

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Year:  2005        PMID: 16248623     DOI: 10.1021/ja0543604

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  26 in total

1.  Engineering a zinc binding site into the de novo designed protein DS119 with a βαβ structure.

Authors:  Cheng Zhu; Changsheng Zhang; Huanhuan Liang; Luhua Lai
Journal:  Protein Cell       Date:  2012-01-10       Impact factor: 14.870

2.  Designing redox potential-controlled protein switches based on mutually exclusive proteins.

Authors:  Qing Peng; Na Kong; Hui-Chuan Eileen Wang; Hongbin Li
Journal:  Protein Sci       Date:  2012-08       Impact factor: 6.725

Review 3.  Converting a protein into a switch for biosensing and functional regulation.

Authors:  Margaret M Stratton; Stewart N Loh
Journal:  Protein Sci       Date:  2011-01       Impact factor: 6.725

4.  Conformational stability of hepatitis C virus NS3 protease.

Authors:  Olga Abian; Sonia Vega; Jose Luis Neira; Adrian Velazquez-Campoy
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

5.  The design and characterization of two proteins with 88% sequence identity but different structure and function.

Authors:  Patrick A Alexander; Yanan He; Yihong Chen; John Orban; Philip N Bryan
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-03       Impact factor: 11.205

6.  Solid-state NMR evidence for β-hairpin structure within MAX8 designer peptide nanofibers.

Authors:  Sarah R Leonard; Ashley R Cormier; Xiaodong Pang; Maxwell I Zimmerman; Huan-Xiang Zhou; Anant K Paravastu
Journal:  Biophys J       Date:  2013-07-02       Impact factor: 4.033

7.  The Tumbleweed: towards a synthetic proteinmotor.

Authors:  Elizabeth H C Bromley; Nathan J Kuwada; Martin J Zuckermann; Roberta Donadini; Laleh Samii; Gerhard A Blab; Gregory J Gemmen; Benjamin J Lopez; Paul M G Curmi; Nancy R Forde; Derek N Woolfson; Heiner Linke
Journal:  HFSP J       Date:  2009-04-28

Review 8.  Structural specificity in coiled-coil interactions.

Authors:  Gevorg Grigoryan; Amy E Keating
Journal:  Curr Opin Struct Biol       Date:  2008-06-12       Impact factor: 6.809

9.  A minimal sequence code for switching protein structure and function.

Authors:  Patrick A Alexander; Yanan He; Yihong Chen; John Orban; Philip N Bryan
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-18       Impact factor: 11.205

10.  Studying protein fold evolution with hybrids of differently folded homologs.

Authors:  Karen V Eaton; William J Anderson; Matthew S Dubrava; Vlad K Kumirov; Emily M Dykstra; Matthew H J Cordes
Journal:  Protein Eng Des Sel       Date:  2015-05-19       Impact factor: 1.650

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