Literature DB >> 16247556

Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3.

Ruth Finkelstein1, Srinivas S L Gampala, Tim J Lynch, Terry L Thomas, Christopher D Rock.   

Abstract

Abscisic acid-responsive gene expression is regulated by numerous transcription factors, including a subgroup of basic leucine zipper factors that bind to the conserved cis-acting sequences known as ABA-responsive elements. Although one of these factors, ABA-insensitive 5 (ABI5), was identified genetically, the paucity of genetic data for the other family members has left it unclear whether they perform unique functions or act redundantly to ABI5 or each other. To test for potential redundancy with ABI5, we identified the family members with most similar effects and interactions in transient expression systems (ABF3 and ABF1), then characterized loss-of-function lines for those loci. The abf1 and abf3 monogenic mutant lines had at most minimal effects on germination or seed-specific gene expression, but the enhanced ABA- and stress-resistance of abf3 abi5 double mutants revealed redundant action of these genes in multiple stress responses of seeds and seedlings. Although ABI5, ABF3, and ABF1 have some overlapping effects, they appear to antagonistically regulate each other's expression at specific stages. Consequently, loss of any one factor may be partially compensated by increased expression of other family members.

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Year:  2005        PMID: 16247556     DOI: 10.1007/s11103-005-8767-2

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  38 in total

Review 1.  Abscisic acid signaling in seeds and seedlings.

Authors:  Ruth R Finkelstein; Srinivas S L Gampala; Christopher D Rock
Journal:  Plant Cell       Date:  2002       Impact factor: 11.277

2.  Protein-protein interactions among the Aux/IAA proteins.

Authors:  J Kim; K Harter; A Theologis
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-28       Impact factor: 11.205

3.  Molecular Cloning and Expression of cor (Cold-Regulated) Genes in Arabidopsis thaliana.

Authors:  R K Hajela; D P Horvath; S J Gilmour; M F Thomashow
Journal:  Plant Physiol       Date:  1990-07       Impact factor: 8.340

4.  Genomic sequencing.

Authors:  G M Church; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

5.  Arabidopsis ABI5 subfamily members have distinct DNA-binding and transcriptional activities.

Authors:  Soo Young Kim; Jianzhong Ma; Philippe Perret; Zhongsen Li; Terry L Thomas
Journal:  Plant Physiol       Date:  2002-10       Impact factor: 8.340

6.  Regulation and role of the Arabidopsis abscisic acid-insensitive 5 gene in abscisic acid, sugar, and stress response.

Authors:  Inès M Brocard; Tim J Lynch; Ruth R Finkelstein
Journal:  Plant Physiol       Date:  2002-08       Impact factor: 8.340

7.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

8.  The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis.

Authors:  Sandra Bensmihen; Sonia Rippa; Guillaume Lambert; Delphine Jublot; Véronique Pautot; Fabienne Granier; Jérôme Giraudat; François Parcy
Journal:  Plant Cell       Date:  2002-06       Impact factor: 11.277

9.  Regulatory networks in seeds integrating developmental, abscisic acid, sugar, and light signaling.

Authors:  Inès M Brocard-Gifford; Tim J Lynch; Ruth R Finkelstein
Journal:  Plant Physiol       Date:  2003-01       Impact factor: 8.340

10.  Analysis of function of the pair-rule genes hairy, even-skipped and fushi tarazu in mosaic Drosophila embryos.

Authors:  P A Lawrence; P Johnston
Journal:  Development       Date:  1989-12       Impact factor: 6.868

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  86 in total

1.  Transcriptional control of aspartate kinase expression during darkness and sugar depletion in Arabidopsis: involvement of bZIP transcription factors.

Authors:  Shai Ufaz; Vijaya Shukla; Yulia Soloveichik; Yelena Golan; Frank Breuer; Zsuzsa Koncz; Gad Galili; Csaba Koncz; Aviah Zilberstein
Journal:  Planta       Date:  2011-01-30       Impact factor: 4.116

2.  Sugar sensing and signaling.

Authors:  Matthew Ramon; Filip Rolland; Jen Sheen
Journal:  Arabidopsis Book       Date:  2008-10-22

3.  OsSDIR1 overexpression greatly improves drought tolerance in transgenic rice.

Authors:  Ting Gao; Yaorong Wu; Yiyue Zhang; Lijing Liu; Yuese Ning; Dongjiang Wang; Hongning Tong; Shouyi Chen; Chengcai Chu; Qi Xie
Journal:  Plant Mol Biol       Date:  2011-04-16       Impact factor: 4.076

4.  Inventory, evolution and expression profiling diversity of the LEA (late embryogenesis abundant) protein gene family in Arabidopsis thaliana.

Authors:  Natacha Bies-Ethève; Pascale Gaubier-Comella; Anne Debures; Eric Lasserre; Edouard Jobet; Monique Raynal; Richard Cooke; Michel Delseny
Journal:  Plant Mol Biol       Date:  2008-02-12       Impact factor: 4.076

Review 5.  Towards a systems biology approach to understanding seed dormancy and germination.

Authors:  Steven Penfield; John King
Journal:  Proc Biol Sci       Date:  2009-07-15       Impact factor: 5.349

6.  ABA-insensitive3, ABA-insensitive5, and DELLAs Interact to activate the expression of SOMNUS and other high-temperature-inducible genes in imbibed seeds in Arabidopsis.

Authors:  Soohwan Lim; Jeongmoo Park; Nayoung Lee; Jinkil Jeong; Shigeo Toh; Asuka Watanabe; Junghyun Kim; Hyojin Kang; Dong Hwan Kim; Naoto Kawakami; Giltsu Choi
Journal:  Plant Cell       Date:  2013-12-10       Impact factor: 11.277

7.  SDIR1 is a RING finger E3 ligase that positively regulates stress-responsive abscisic acid signaling in Arabidopsis.

Authors:  Yiyue Zhang; Chengwei Yang; Yin Li; Nuoyan Zheng; Hao Chen; Qingzhen Zhao; Ting Gao; Huishan Guo; Qi Xie
Journal:  Plant Cell       Date:  2007-06-15       Impact factor: 11.277

8.  Functional roles of the pepper antimicrobial protein gene, CaAMP1, in abscisic acid signaling, and salt and drought tolerance in Arabidopsis.

Authors:  Sung Chul Lee; Byung Kook Hwang
Journal:  Planta       Date:  2008-10-28       Impact factor: 4.116

9.  The Arabidopsis ABA-activated kinase OST1 phosphorylates the bZIP transcription factor ABF3 and creates a 14-3-3 binding site involved in its turnover.

Authors:  Caroline Sirichandra; Marlène Davanture; Benjamin E Turk; Michel Zivy; Benoît Valot; Jeffrey Leung; Sylvain Merlot
Journal:  PLoS One       Date:  2010-11-10       Impact factor: 3.240

10.  Transcriptome analysis reveals absence of unintended effects in drought-tolerant transgenic plants overexpressing the transcription factor ABF3.

Authors:  Ashraf Abdeen; Jaimie Schnell; Brian Miki
Journal:  BMC Genomics       Date:  2010-01-28       Impact factor: 3.969

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