Literature DB >> 19605392

Towards a systems biology approach to understanding seed dormancy and germination.

Steven Penfield1, John King.   

Abstract

Seed germination is the first adaptive decision in the development of many land plants. Advances in genetics and molecular physiology have taught us much about the control of germination using the model plant Arabidopsis thaliana. Here we review the current state of the art with an emphasis on mechanistic considerations and explore the potential impact of a systems biology approach to the problem.

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Year:  2009        PMID： 19605392      PMCID： PMC2817297          DOI： 10.1098/rspb.2009.0592

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN： 0962-8452            Impact factor:   5.349


  57 in total

1.  The AIP2 E3 ligase acts as a novel negative regulator of ABA signaling by promoting ABI3 degradation.

Authors:  Xiuren Zhang; Virginia Garreton; Nam-Hai Chua
Journal:  Genes Dev       Date:  2005-07-01       Impact factor: 11.361

2.  GIGANTEA regulates phytochrome A-mediated photomorphogenesis independently of its role in the circadian clock.

Authors:  Karina Andrea Oliverio; María Crepy; Ellen L Martin-Tryon; Raechel Milich; Stacey L Harmer; Jo Putterill; Marcelo J Yanovsky; Jorge J Casal
Journal:  Plant Physiol       Date:  2007-03-23       Impact factor: 8.340

3.  Seed germination of GA-insensitive sleepy1 mutants does not require RGL2 protein disappearance in Arabidopsis.

Authors:  Tohru Ariizumi; Camille M Steber
Journal:  Plant Cell       Date:  2007-03-23       Impact factor: 11.277

4.  Arabidopsis ABA INSENSITIVE4 regulates lipid mobilization in the embryo and reveals repression of seed germination by the endosperm.

Authors:  Steven Penfield; Yi Li; Alison D Gilday; Stuart Graham; Ian A Graham
Journal:  Plant Cell       Date:  2006-07-14       Impact factor: 11.277

5.  Proteolysis-independent downregulation of DELLA repression in Arabidopsis by the gibberellin receptor GIBBERELLIN INSENSITIVE DWARF1.

Authors:  Tohru Ariizumi; Kohji Murase; Tai-Ping Sun; Camille M Steber
Journal:  Plant Cell       Date:  2008-09-30       Impact factor: 11.277

6.  Coordinated regulation of Arabidopsis thaliana development by light and gibberellins.

Authors:  Suhua Feng; Cristina Martinez; Giuliana Gusmaroli; Yu Wang; Junli Zhou; Feng Wang; Liying Chen; Lu Yu; Juan M Iglesias-Pedraz; Stefan Kircher; Eberhard Schäfer; Xiangdong Fu; Liu-Min Fan; Xing Wang Deng
Journal:  Nature       Date:  2008-01-24       Impact factor: 49.962

7.  A role for multiple circadian clock genes in the response to signals that break seed dormancy in Arabidopsis.

Authors:  Steven Penfield; Anthony Hall
Journal:  Plant Cell       Date:  2009-06-19       Impact factor: 11.277

8.  The isolation of abscisic acid (ABA) deficient mutants by selection of induced revertants in non-germinating gibberellin sensitive lines of Arabidopsis thaliana (L.) heynh.

Authors:  M Koornneef; M L Jorna; D L Brinkhorst-van der Swan; C M Karssen
Journal:  Theor Appl Genet       Date:  1982-12       Impact factor: 5.699

9.  Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana.

Authors:  James C W Locke; László Kozma-Bognár; Peter D Gould; Balázs Fehér; Eva Kevei; Ferenc Nagy; Matthew S Turner; Anthony Hall; Andrew J Millar
Journal:  Mol Syst Biol       Date:  2006-11-14       Impact factor: 11.429

10.  Numerical analysis of a comprehensive model of M-phase control in Xenopus oocyte extracts and intact embryos.

Authors:  B Novak; J J Tyson
Journal:  J Cell Sci       Date:  1993-12       Impact factor: 5.285
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  23 in total

1.  An endogenous growth pattern of roots is revealed in seedlings grown in microgravity.

Authors:  Katherine D L Millar; Christina M Johnson; Richard E Edelmann; John Z Kiss
Journal:  Astrobiology       Date:  2011-10-04       Impact factor: 4.335

2.  RLK7, a leucine-rich repeat receptor-like kinase, is required for proper germination speed and tolerance to oxidative stress in Arabidopsis thaliana.

Authors:  Delphine Pitorre; Christel Llauro; Edouard Jobet; Jocelyne Guilleminot; Jean-Paul Brizard; Michel Delseny; Eric Lasserre
Journal:  Planta       Date:  2010-09-02       Impact factor: 4.116

3.  Connecting the sun to flowering in sunflower adaptation.

Authors:  Benjamin K Blackman; Scott D Michaels; Loren H Rieseberg
Journal:  Mol Ecol       Date:  2011-06-16       Impact factor: 6.185

4.  Arabidopsis nudix hydrolase 7 plays a role in seed germination.

Authors:  Xin Zeng; Yong-Fang Li; Ramamurthy Mahalingam
Journal:  Planta       Date:  2014-02-07       Impact factor: 4.116

5.  Genome-wide analysis of thiourea-modulated salinity stress-responsive transcripts in seeds of Brassica juncea: identification of signalling and effector components of stress tolerance.

Authors:  A K Srivastava; N K Ramaswamy; P Suprasanna; S F D'Souza
Journal:  Ann Bot       Date:  2010-08-24       Impact factor: 4.357

6.  Seed Dormancy in Arabidopsis Is Controlled by Alternative Polyadenylation of DOG1.

Authors:  Malgorzata Cyrek; Halina Fedak; Arkadiusz Ciesielski; Yanwu Guo; Aleksandra Sliwa; Lien Brzezniak; Katarzyna Krzyczmonik; Zbigniew Pietras; Szymon Kaczanowski; Fuquan Liu; Szymon Swiezewski
Journal:  Plant Physiol       Date:  2015-11-30       Impact factor: 8.340

7.  Regulation of seed germination in the close Arabidopsis relative Lepidium sativum: a global tissue-specific transcript analysis.

Authors:  Karl Morris; Ada Linkies; Kerstin Müller; Krystyna Oracz; Xiaofeng Wang; James R Lynn; Gerhard Leubner-Metzger; William E Finch-Savage
Journal:  Plant Physiol       Date:  2011-02-14       Impact factor: 8.340

Review 8.  Circadian clock-dependent gating in ABA signalling networks.

Authors:  David Seung; Juan Pablo Matte Risopatron; Brian Joseph Jones; Jan Marc
Journal:  Protoplasma       Date:  2011-07-20       Impact factor: 3.356

9.  Developmental transitions in Arabidopsis are regulated by antisense RNAs resulting from bidirectionally transcribed genes.

Authors:  Katarzyna Krzyczmonik; Agata Wroblewska-Swiniarska; Szymon Swiezewski
Journal:  RNA Biol       Date:  2017-05-17       Impact factor: 4.652

10.  The plant pathogen Pseudomonas aeruginosa triggers a DELLA-dependent seed germination arrest in Arabidopsis.

Authors:  Hicham Chahtane; Thanise Nogueira Füller; Pierre-Marie Allard; Laurence Marcourt; Emerson Ferreira Queiroz; Venkatasalam Shanmugabalaji; Jacques Falquet; Jean-Luc Wolfender; Luis Lopez-Molina
Journal:  Elife       Date:  2018-08-28       Impact factor: 8.140
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