Literature DB >> 16246362

Temperature softening of a protein in single-molecule experiments.

Michael Schlierf1, Matthias Rief.   

Abstract

Mechanical flexibility is crucial for the function of proteins. However, such material properties are not easily accessible experimentally. We used single-molecule force spectroscopy to study the stiffness of a single domain of Dictyostelium discoideum filamin (ddFLN4) in a temperature range from 5 degrees C to 37 degrees C. Analyzing the distributions of unfolding forces allowed us to extract transition barrier heights and positions of the underlying energy landscape. We found a marked narrowing of unfolding force distributions with increasing temperature. This narrowing reflects an increase in transition state position from 2.7 A to 7.8 A and thus a reduction of the molecular spring constant of the protein by a factor of 7. We suggest this temperature softening reflects a shift in the nature of the interactions responsible for mechanical stability from hydrogen bonds to hydrophobic interactions. This result has important consequences for all interpretations of protein mechanical studies if experimental results obtained at room temperature are to be transferred to physiological temperatures.

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Year:  2005        PMID: 16246362     DOI: 10.1016/j.jmb.2005.09.070

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  36 in total

1.  Effects of pH on proteins: predictions for ensemble and single-molecule pulling experiments.

Authors:  Edward P O'Brien; Bernard R Brooks; D Thirumalai
Journal:  J Am Chem Soc       Date:  2011-12-27       Impact factor: 15.419

2.  Computational investigation of the effect of thermal perturbation on the mechanical unfolding of titin I27.

Authors:  Navneet Bung; U Deva Priyakumar
Journal:  J Mol Model       Date:  2011-11-27       Impact factor: 1.810

3.  Low folding cooperativity of HP35 revealed by single-molecule force spectroscopy and molecular dynamics simulation.

Authors:  Chunmei Lv; Cheng Tan; Meng Qin; Dawei Zou; Yi Cao; Wei Wang
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

4.  Prying open single GroES ring complexes by force reveals cooperativity across domains.

Authors:  Akiko Ikeda-Kobayashi; Yukinori Taniguchi; David J Brockwell; Emanuele Paci; Masaru Kawakami
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

5.  Single-molecule unfolding force distributions reveal a funnel-shaped energy landscape.

Authors:  Michael Schlierf; Matthias Rief
Journal:  Biophys J       Date:  2005-12-16       Impact factor: 4.033

6.  Anisotropic deformation response of single protein molecules.

Authors:  Hendrik Dietz; Felix Berkemeier; Morten Bertz; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-14       Impact factor: 11.205

7.  Protein structure by mechanical triangulation.

Authors:  Hendrik Dietz; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

8.  Covalent chemistry on distended proteins.

Authors:  Dennis E Discher; Nishant Bhasin; Colin P Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-08       Impact factor: 11.205

9.  Secondary structure, mechanical stability, and location of transition state of proteins.

Authors:  Mai Suan Li
Journal:  Biophys J       Date:  2007-06-22       Impact factor: 4.033

Review 10.  Conformational changes and signaling in cell and matrix physics.

Authors:  André E X Brown; Dennis E Discher
Journal:  Curr Biol       Date:  2009-09-15       Impact factor: 10.834

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