Literature DB >> 16226926

4-Pyridoxolactonase from a symbiotic nitrogen-fixing bacterium Mesorhizobium loti: cloning, expression, and characterization.

Junichi Funami1, Yu Yoshikane, Hitoshi Kobayashi, Nana Yokochi, Baiqiang Yuan, Kozo Iwasaki, Kouhei Ohnishi, Toshiharu Yagi.   

Abstract

4-Pyridoxolactonase is involved in the degradation pathway for pyridoxine, a free form of vitamin B6. The gene (mlr6805) encoding the putative 4-pyridoxolactonase of nitrogen fixing symbiotic microorganism Mesorhizobium loti MAFF303099 has been identified based on the genome database. The gene was cloned and overexpressed in a cotransformant Escherichia coli cell. The recombinant enzyme was dimeric protein and contained one mole of Zn2+ per mole of subunit. The enzyme showed about 30% identity with various N-acylhomoserine lactone lactonases and metallo-beta-lactamases. The phylogram made with ClustalW shows that 4-pyridoxolactonase makes a cluster with Agrobacterium tumefaciens acyl-homoserine lactone lactonase. The alignment of amino acid sequences suggests that 4-pyridoxolactonase has three histidine residues probably involved in binding of Zn2+.

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Year:  2005        PMID: 16226926     DOI: 10.1016/j.bbapap.2005.08.026

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  7 in total

1.  Crystallization and preliminary X-ray analysis of 4-pyridoxolactonase from Mesorhizobium loti.

Authors:  Sayoko Matsuda; Nana Yokochi; Yu Yoshikane; Jun Kobayashi; Chu Nhat Huy; Seiki Baba; Seiki Kuramitsu; Bunzo Mikami; Toshiharu Yagi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-08-22

2.  Structure determination and characterization of the vitamin B6 degradative enzyme (E)-2-(acetamidomethylene)succinate hydrolase.

Authors:  Kathryn M McCulloch; Tathagata Mukherjee; Tadhg P Begley; Steven E Ealick
Journal:  Biochemistry       Date:  2010-02-16       Impact factor: 3.162

3.  Structure of the PLP degradative enzyme 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase from Mesorhizobium loti MAFF303099 and its mechanistic implications.

Authors:  Kathryn M McCulloch; Tathagata Mukherjee; Tadhg P Begley; Steven E Ealick
Journal:  Biochemistry       Date:  2009-05-19       Impact factor: 3.162

4.  Gene identification and structural characterization of the pyridoxal 5'-phosphate degradative protein 3-hydroxy-2-methylpyridine-4,5-dicarboxylate decarboxylase from mesorhizobium loti MAFF303099.

Authors:  Tathagata Mukherjee; Kathryn M McCulloch; Steven E Ealick; Tadhg P Begley
Journal:  Biochemistry       Date:  2007-10-31       Impact factor: 3.162

5.  PLP catabolism: identification of the 4-pyridoxic acid dehydrogenase gene in Mesorhizobium loti MAFF303099.

Authors:  Tathagata Mukherjee; Cynthia Kinsland; Tadhg P Begley
Journal:  Bioorg Chem       Date:  2007-09-14       Impact factor: 5.275

6.  Structure of 4-pyridoxolactonase from Mesorhizobium loti.

Authors:  Jun Kobayashi; Yu Yoshikane; Toshiharu Yagi; Seiki Baba; Kimihiko Mizutani; Nobuyuki Takahashi; Bunzo Mikami
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-03-25       Impact factor: 1.056

7.  How does (E)-2-(acetamidomethylene)succinate bind to its hydrolase? From the binding process to the final result.

Authors:  Ji-Long Zhang; Qing-Chuan Zheng; Zheng-Qiang Li; Hong-Xing Zhang
Journal:  PLoS One       Date:  2013-01-07       Impact factor: 3.240

  7 in total

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