Literature DB >> 16222335

Regulation of GTP hydrolysis prior to ribosomal AUG selection during eukaryotic translation initiation.

Romit Majumdar1, Umadas Maitra.   

Abstract

Genetic studies in yeast have shown that the translation initiation factor eIF5 plays an important role in the selection of the AUG start codon. In order to ensure translation fidelity, the hydrolysis of GTP bound to the 40S preinitiation complex (40S.Met-tRNA(i).eIF2.GTP), promoted by eIF5, must occur only when the complex has selected the AUG start codon. However, the mechanism that prevents the eIF5-promoted GTP hydrolysis, prior to AUG selection by the ribosomal machinery, is not known. In this work, we show that the presence of initiation factors eIF1, eIF1A and eIF3 in the 40S preinitiation complex (40S.eIF1.eIF1A.eIF3.Met-tRNA(i).eIF2.GTP) and the subsequent binding of the preinitiation complex to eIF4F bound at the 5'-cap structure of mRNA are necessary for preventing eIF5-promoted hydrolysis of GTP in the 40S preinitiation complex. This block in GTP hydrolysis is released upon AUG selection by the 40S preinitiation complex. These results, taken together, demonstrate the biochemical requirements for regulation of GTP hydrolysis and its coupling to the AUG selection process during translation initiation.

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Year:  2005        PMID: 16222335      PMCID: PMC1276726          DOI: 10.1038/sj.emboj.7600844

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  31 in total

1.  Mutational analysis of mammalian translation initiation factor 5 (eIF5): role of interaction between the beta subunit of eIF2 and eIF5 in eIF5 function in vitro and in vivo.

Authors:  S Das; U Maitra
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

2.  Multiple roles for the C-terminal domain of eIF5 in translation initiation complex assembly and GTPase activation.

Authors:  K Asano; A Shalev; L Phan; K Nielsen; J Clayton; L Valásek; T F Donahue; A G Hinnebusch
Journal:  EMBO J       Date:  2001-05-01       Impact factor: 11.598

3.  A multifactor complex of eukaryotic initiation factors, eIF1, eIF2, eIF3, eIF5, and initiator tRNA(Met) is an important translation initiation intermediate in vivo.

Authors:  K Asano; J Clayton; A Shalev; A G Hinnebusch
Journal:  Genes Dev       Date:  2000-10-01       Impact factor: 11.361

4.  Eukaryotic translation initiation factor 5 functions as a GTPase-activating protein.

Authors:  S Das; R Ghosh; U Maitra
Journal:  J Biol Chem       Date:  2000-11-22       Impact factor: 5.157

5.  The joining of ribosomal subunits in eukaryotes requires eIF5B.

Authors:  T V Pestova; I B Lomakin; J H Lee; S K Choi; T E Dever; C U Hellen
Journal:  Nature       Date:  2000-01-20       Impact factor: 49.962

Review 6.  eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation.

Authors:  A C Gingras; B Raught; N Sonenberg
Journal:  Annu Rev Biochem       Date:  1999       Impact factor: 23.643

7.  A conformational change in the eukaryotic translation preinitiation complex and release of eIF1 signal recognition of the start codon.

Authors:  David Maag; Christie A Fekete; Zygmunt Gryczynski; Jon R Lorsch
Journal:  Mol Cell       Date:  2005-01-21       Impact factor: 17.970

8.  Canonical eukaryotic initiation factors determine initiation of translation by internal ribosomal entry.

Authors:  T V Pestova; C U Hellen; I N Shatsky
Journal:  Mol Cell Biol       Date:  1996-12       Impact factor: 4.272

9.  Purification and characterization of bacterially expressed mammalian translation initiation factor 5 (eIF-5): demonstration that eIF-5 forms a specific complex with eIF-2.

Authors:  J Chaudhuri; K Das; U Maitra
Journal:  Biochemistry       Date:  1994-04-26       Impact factor: 3.162

10.  Function of eukaryotic initiation factor 5 in the formation of an 80 S ribosomal polypeptide chain initiation complex.

Authors:  A Chakrabarti; U Maitra
Journal:  J Biol Chem       Date:  1991-07-25       Impact factor: 5.157

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  13 in total

1.  Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states.

Authors:  Laure Yatime; Yves Mechulam; Sylvain Blanquet; Emmanuelle Schmitt
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-13       Impact factor: 11.205

Review 2.  Toward a Kinetic Understanding of Eukaryotic Translation.

Authors:  Masaaki Sokabe; Christopher S Fraser
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-02-01       Impact factor: 10.005

3.  West Nile virus infection does not induce PKR activation in rodent cells.

Authors:  H Elbahesh; S V Scherbik; M A Brinton
Journal:  Virology       Date:  2011-10-07       Impact factor: 3.616

4.  Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.

Authors:  Etienne Dubiez; Alexey Aleksandrov; Christine Lazennec-Schurdevin; Yves Mechulam; Emmanuelle Schmitt
Journal:  Nucleic Acids Res       Date:  2015-02-17       Impact factor: 16.971

5.  Functional domains and the antiviral effect of the double-stranded RNA-dependent protein kinase PKR from Paralichthys olivaceus.

Authors:  Rong Zhu; Yi-Bing Zhang; Qi-Ya Zhang; Jian-Fang Gui
Journal:  J Virol       Date:  2008-04-30       Impact factor: 5.103

Review 6.  Should I stay or should I go? Eukaryotic translation initiation factors 1 and 1A control start codon recognition.

Authors:  Sarah F Mitchell; Jon R Lorsch
Journal:  J Biol Chem       Date:  2008-06-30       Impact factor: 5.157

Review 7.  Evolution of the archaeal and mammalian information processing systems: towards an archaeal model for human disease.

Authors:  Zhe Lyu; William B Whitman
Journal:  Cell Mol Life Sci       Date:  2016-06-03       Impact factor: 9.261

8.  Kinetic analysis of late steps of eukaryotic translation initiation.

Authors:  Michael G Acker; Byung-Sik Shin; Jagpreet S Nanda; Adesh K Saini; Thomas E Dever; Jon R Lorsch
Journal:  J Mol Biol       Date:  2008-10-19       Impact factor: 5.469

Review 9.  Impact of protein kinase PKR in cell biology: from antiviral to antiproliferative action.

Authors:  M A García; J Gil; I Ventoso; S Guerra; E Domingo; C Rivas; M Esteban
Journal:  Microbiol Mol Biol Rev       Date:  2006-12       Impact factor: 11.056

Review 10.  'Ribozoomin'--translation initiation from the perspective of the ribosome-bound eukaryotic initiation factors (eIFs).

Authors:  Leos Shivaya Valásek
Journal:  Curr Protein Pept Sci       Date:  2012-06       Impact factor: 3.272

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