Literature DB >> 16219324

Visualization of the phosphorylated active site loop of the cytoplasmic B domain of the mannitol transporter II(Mannitol) of the Escherichia coli phosphotransferase system by NMR spectroscopy and residual dipolar couplings.

Jeong-Yong Suh1, Chun Tang, Mengli Cai, G Marius Clore.   

Abstract

The solution structure of a stably phosphorylated form of the cytoplasmic B domain of the mannitol-specific transporter (IIB(Mtl)) of the Escherichia coli phosphotransferase system, containing a mutation of the active site Cys384 to Ser, has been solved by NMR. The strategy employed relies principally on backbone residual dipolar couplings recorded in three different alignment media, supplemented by nuclear Overhauser enhancement data and torsion angle restraints related specifically to the active site loop (residues 383-393). As judged from the dipolar coupling data, the remainder of the structure is unchanged upon phosphorylation within the errors of the coordinates of the previously determined solution structure of unphosphorylated wild-type IIB(Mtl). Thus, only the active site loop was refined. Phosphorylation results in a backbone atomic rms shift of approximately 0.7 angstroms in the active site loop. The resulting conformation is less than 0.5 angstroms away from the equivalent P-loop in both the low and high molecular mass eukaryotic tyrosine phosphatases. 3J(NP) coupling constant measurements using quantitative J-correlation spectroscopy provide a direct demonstration of a hydrogen bond between the phosphoryl group and the backbone amide of Ser391 at position i + 7 from phospho-Ser384, with an approximately linear P-O-H(N) bond angle. The structure also reveals additional hydrogen bonding interactions involving the backbone amides of residues at positions i + 4 and i + 5, and the hydroxyl groups of two serine residues at positions i + 6 and i + 7 that stabilize the phosphoryl group.

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Year:  2005        PMID: 16219324     DOI: 10.1016/j.jmb.2005.09.033

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  7 in total

1.  Solution structure of the IIAChitobiose-HPr complex of the N,N'-diacetylchitobiose branch of the Escherichia coli phosphotransferase system.

Authors:  Young-Sang Jung; Mengli Cai; G Marius Clore
Journal:  J Biol Chem       Date:  2012-05-16       Impact factor: 5.157

2.  Intramolecular domain-domain association/dissociation and phosphoryl transfer in the mannitol transporter of Escherichia coli are not coupled.

Authors:  Jeong-Yong Suh; Junji Iwahara; G Marius Clore
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-21       Impact factor: 11.205

3.  Solution structure of the IIAChitobiose-IIBChitobiose complex of the N,N'-diacetylchitobiose branch of the Escherichia coli phosphotransferase system.

Authors:  Young-Sang Jung; Mengli Cai; G Marius Clore
Journal:  J Biol Chem       Date:  2009-12-03       Impact factor: 5.157

4.  Localization of the substrate-binding site in the homodimeric mannitol transporter, EIImtl, of Escherichia coli.

Authors:  Milena Opacić; Erwin P P Vos; Ben H Hesp; Jaap Broos
Journal:  J Biol Chem       Date:  2010-06-03       Impact factor: 5.157

5.  Biophysical characterization of the domain association between cytosolic A and B domains of the mannitol transporter enzymes II(Mtl) in the presence and absence of a connecting linker.

Authors:  Ko On Lee; Eun-Hee Kim; Gowoon Kim; Jea Yeon Jung; Shigeru Katayama; Soichiro Nakamura; Jeong-Yong Suh
Journal:  Protein Sci       Date:  2016-08-01       Impact factor: 6.725

Review 6.  Structure, dynamics and biophysics of the cytoplasmic protein-protein complexes of the bacterial phosphoenolpyruvate: sugar phosphotransferase system.

Authors:  G Marius Clore; Vincenzo Venditti
Journal:  Trends Biochem Sci       Date:  2013-09-19       Impact factor: 13.807

7.  Detection and assignment of phosphoserine and phosphothreonine residues by (13)C- (31)P spin-echo difference NMR spectroscopy.

Authors:  Lawrence P McIntosh; Hyun-Seo Kang; Mark Okon; Mary L Nelson; Barbara J Graves; Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2008-11-12       Impact factor: 2.835

  7 in total

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