Literature DB >> 16218869

Structural and functional comparison of HemN to other radical SAM enzymes.

Gunhild Layer1, Eric Kervio, Gaby Morlock, Dirk W Heinz, Dieter Jahn, Janos Retey, Wolf-Dieter Schubert.   

Abstract

Radical SAM enzymes have only recently been recognized as an ancient family sharing an unusual radical-based reaction mechanism. This late appreciation is due to the extreme oxygen sensitivity of most radical SAM enzymes, making their characterization particularly arduous. Nevertheless, realization that the novel apposition of the established cofactors S-adenosylmethionine and [4Fe-4S] cluster creates an explosive source of catalytic radicals, the appreciation of the sheer size of this previously neglected family, and the rapid succession of three successfully solved crystal structures within a year have ensured that this family has belatedly been noted. In this review, we report the characterization of two enzymes: the established radical SAM enzyme, HemN or oxygen-independent coproporphyrinogen III oxidase from Escherichia coli, and littorine mutase, a presumed radical SAM enzyme, responsible for the conversion of littorine to hyoscyamine in plants. The enzymes are compared to other radical SAM enzymes and in particular the three reported crystal structures from this family, HemN, biotin synthase and MoaA, are discussed.

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Year:  2005        PMID: 16218869     DOI: 10.1515/BC.2005.113

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  16 in total

Review 1.  The tetrapyrrole biosynthetic pathway and its regulation in Rhodobacter capsulatus.

Authors:  Sébastien Zappa; Keran Li; Carl E Bauer
Journal:  Adv Exp Med Biol       Date:  2010       Impact factor: 2.622

2.  The radical SAM enzyme AlbA catalyzes thioether bond formation in subtilosin A.

Authors:  Leif Flühe; Thomas A Knappe; Michael J Gattner; Antje Schäfer; Olaf Burghaus; Uwe Linne; Mohamed A Marahiel
Journal:  Nat Chem Biol       Date:  2012-02-26       Impact factor: 15.040

3.  Crystal structure of the nitrogenase-like dark operative protochlorophyllide oxidoreductase catalytic complex (ChlN/ChlB)2.

Authors:  Markus J Bröcker; Sebastian Schomburg; Dirk W Heinz; Dieter Jahn; Wolf-Dieter Schubert; Jürgen Moser
Journal:  J Biol Chem       Date:  2010-06-17       Impact factor: 5.157

4.  RlmN and Cfr are radical SAM enzymes involved in methylation of ribosomal RNA.

Authors:  Feng Yan; Jacqueline M LaMarre; Rene Röhrich; Jochen Wiesner; Hassan Jomaa; Alexander S Mankin; Danica Galonić Fujimori
Journal:  J Am Chem Soc       Date:  2010-03-24       Impact factor: 15.419

Review 5.  Radical S-adenosylmethionine (SAM) enzymes in cofactor biosynthesis: a treasure trove of complex organic radical rearrangement reactions.

Authors:  Angad P Mehta; Sameh H Abdelwahed; Nilkamal Mahanta; Dmytro Fedoseyenko; Benjamin Philmus; Lisa E Cooper; Yiquan Liu; Isita Jhulki; Steven E Ealick; Tadhg P Begley
Journal:  J Biol Chem       Date:  2014-12-04       Impact factor: 5.157

Review 6.  Radical SAM enzymes involved in the biosynthesis of purine-based natural products.

Authors:  Vahe Bandarian
Journal:  Biochim Biophys Acta       Date:  2012-08-03

7.  Substrate recognition, protein dynamics, and iron-sulfur cluster in Pseudomonas aeruginosa adenosine 5'-phosphosulfate reductase.

Authors:  Justin Chartron; Kate S Carroll; Carrie Shiau; Hong Gao; Julie A Leary; Carolyn R Bertozzi; C David Stout
Journal:  J Mol Biol       Date:  2006-09-01       Impact factor: 5.469

8.  Discovery of multiple modified F(430) coenzymes in methanogens and anaerobic methanotrophic archaea suggests possible new roles for F(430) in nature.

Authors:  Kylie D Allen; Gunter Wegener; Robert H White
Journal:  Appl Environ Microbiol       Date:  2014-08-08       Impact factor: 4.792

9.  Anaerobic sulfatase-maturating enzyme--a mechanistic link with glycyl radical-activating enzymes?

Authors:  Alhosna Benjdia; Sowmya Subramanian; Jérôme Leprince; Hubert Vaudry; Michael K Johnson; Olivier Berteau
Journal:  FEBS J       Date:  2010-03-09       Impact factor: 5.542

Review 10.  Revealing nature's synthetic potential through the study of ribosomal natural product biosynthesis.

Authors:  Kyle L Dunbar; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2013-01-08       Impact factor: 5.100

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