Literature DB >> 16214739

Towards writing the encyclopedia of life: an introduction to DNA barcoding.

Vincent Savolainen1, Robyn S Cowan, Alfried P Vogler, George K Roderick, Richard Lane.   

Abstract

An international consortium of major natural history museums, herbaria and other organizations has launched an ambitious project, the 'Barcode of Life Initiative', to promote a process enabling the rapid and inexpensive identification of the estimated 10 million species on Earth. DNA barcoding is a diagnostic technique in which short DNA sequence(s) can be used for species identification. The first international scientific conference on Barcoding of Life was held at the Natural History Museum in London in February 2005, and here we review the scientific challenges discussed during this conference and in previous publications. Although still controversial, the scientific benefits of DNA barcoding include: (i) enabling species identification, including any life stage or fragment, (ii) facilitating species discoveries based on cluster analyses of gene sequences (e.g. cox1 = CO1, in animals), (iii) promoting development of handheld DNA sequencing technology that can be applied in the field for biodiversity inventories and (iv) providing insight into the diversity of life.

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Year:  2005        PMID: 16214739      PMCID: PMC1609222          DOI: 10.1098/rstb.2005.1730

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  43 in total

1.  Biological identifications through DNA barcodes.

Authors:  Paul D N Hebert; Alina Cywinska; Shelley L Ball; Jeremy R deWaard
Journal:  Proc Biol Sci       Date:  2003-02-07       Impact factor: 5.349

Review 2.  DNA barcoding of parasites and invertebrate disease vectors: what you don't know can hurt you.

Authors:  Nora J Besansky; David W Severson; Michael T Ferdig
Journal:  Trends Parasitol       Date:  2003-12

3.  Molecular systematics: Counting angels with DNA.

Authors:  Mark Blaxter
Journal:  Nature       Date:  2003-01-09       Impact factor: 49.962

4.  Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species.

Authors:  Paul D N Hebert; Sujeevan Ratnasingham; Jeremy R deWaard
Journal:  Proc Biol Sci       Date:  2003-08-07       Impact factor: 5.349

5.  DNA points the way ahead in taxonomy.

Authors:  Diethard Tautz; Peter Arctander; Alessandro Minelli; Richard H Thomas; Alfried P Vogler
Journal:  Nature       Date:  2002-08-01       Impact factor: 49.962

6.  Marine survey sees net gain in number of fish species.

Authors:  Betsy Mason
Journal:  Nature       Date:  2003-10-30       Impact factor: 49.962

7.  A plea for DNA banking.

Authors:  Vincent Savolainen; Gail Reeves
Journal:  Science       Date:  2004-06-04       Impact factor: 47.728

8.  DNA taxonomy of a neglected animal phylum: an unexpected diversity of tardigrades.

Authors:  Mark Blaxter; Ben Elsworth; Jennifer Daub
Journal:  Proc Biol Sci       Date:  2004-05-07       Impact factor: 5.349

9.  Testing the utility of partial COI sequences for phylogenetic estimates of gastropod relationships.

Authors:  Elpidio A Remigio; Paul D N Hebert
Journal:  Mol Phylogenet Evol       Date:  2003-12       Impact factor: 4.286

10.  Genetic evidence for two species of elephant in Africa.

Authors:  A L Roca; N Georgiadis; J Pecon-Slattery; S J O'Brien
Journal:  Science       Date:  2001-08-24       Impact factor: 47.728

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  93 in total

1.  New insights into molecular evolution: prospects from the Barcode of Life Initiative (BOLI).

Authors:  Filipe O Costa; Gary R Carvalho
Journal:  Theory Biosci       Date:  2010-05-26       Impact factor: 1.919

2.  DNA barcodes: genes, genomics, and bioinformatics.

Authors:  W John Kress; David L Erickson
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-19       Impact factor: 11.205

3.  DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae).

Authors:  T L Whitworth; R D Dawson; H Magalon; E Baudry
Journal:  Proc Biol Sci       Date:  2007-07-22       Impact factor: 5.349

4.  Forensic botany: species identification of botanical trace evidence using a multigene barcoding approach.

Authors:  Gianmarco Ferri; Milena Alù; Beatrice Corradini; Giovanni Beduschi
Journal:  Int J Legal Med       Date:  2009-06-07       Impact factor: 2.686

Review 5.  20 years since the introduction of DNA barcoding: from theory to application.

Authors:  Živa Fišer Pečnikar; Elena V Buzan
Journal:  J Appl Genet       Date:  2013-11-08       Impact factor: 3.240

6.  Discordance in variation of the ITS region and the mitochondrial COI gene in the subterranean amphipod Crangonyx islandicus.

Authors:  Etienne Kornobis; Snæbjörn Pálsson
Journal:  J Mol Evol       Date:  2011-08-04       Impact factor: 2.395

7.  DNA BARCODING IN LAND PLANTS: DEVELOPING STANDARDS TO QUANTIFY AND MAXIMIZE SUCCESS.

Authors:  David L Erickson; John Spouge; Alissa Resch; Lee A Weigt; W John Kress
Journal:  Taxon       Date:  2008-11-01       Impact factor: 2.338

Review 8.  DNA-based methods for eriophyoid mite studies: review, critical aspects, prospects and challenges.

Authors:  Maria Navajas; Denise Navia
Journal:  Exp Appl Acarol       Date:  2009-10-14       Impact factor: 2.132

9.  Detection and Localization of Wolbachia in Thrips palmi Karny (Thysanoptera: Thripidae).

Authors:  Gunjan Kumar Saurav; Guisuibou Daimei; Vipin Singh Rana; Sonam Popli; Raman Rajagopal
Journal:  Indian J Microbiol       Date:  2016-02-13       Impact factor: 2.461

10.  Secondary structure and phylogenetic utility of the ribosomal large subunit (28S) in monogeneans of the genus Thaparocleidus and Bifurcohaptor (Monogenea: Dactylogyridae).

Authors:  Anshu Chaudhary; Hridaya Shanker Singh
Journal:  J Parasit Dis       Date:  2012-07-03
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