Literature DB >> 16204557

Diversity and distribution of sulfate-reducing bacteria in permanently frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica.

Elizabeth A Karr1, W Matthew Sattley, Melissa R Rice, Deborah O Jung, Michael T Madigan, Laurie A Achenbach.   

Abstract

The permanently frozen freshwater Lake Fryxell, located in the Dry Valleys of Antarctica, exhibits an ideal geochemistry for microbial sulfate reduction. To investigate the population of sulfate-reducing bacteria in Lake Fryxell, both 16S rRNA gene and metabolic primer sets targeting the dsrA gene for the dissimilatory sulfite reductase alpha subunit were employed to analyze environmental DNA obtained from the water column and sediments of Lake Fryxell. In addition, enrichment cultures of sulfate-reducing bacteria established at 4 degrees C from Lake Fryxell water were also screened using the dsrA primer set. The sequence information obtained showed that a diverse group of sulfate-reducing prokaryotes of the domain Bacteria inhabit Lake Fryxell. With one exception, the enrichment culture sequences were not represented within the environmental sequences. Sequence data were compared with the geochemical profile of Lake Fryxell to identify possible connections between the diversity of sulfate-reducing bacteria and limnological conditions. Several clone groups were highly localized with respect to lake depth and, therefore, experienced specific physiochemical conditions. However, all sulfate-reducing bacteria inhabiting Lake Fryxell must function under the constantly cold conditions characteristic of this extreme environment.

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Year:  2005        PMID: 16204557      PMCID: PMC1265979          DOI: 10.1128/AEM.71.10.6353-6359.2005

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  20 in total

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Authors:  C Knoblauch; B B Jørgensen; J Harder
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

2.  Phylogenetic affiliation and quantification of psychrophilic sulfate-reducing isolates in marine Arctic sediments.

Authors:  K Sahm; C Knoblauch; R Amann
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

3.  Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes.

Authors:  D Minz; J L Flax; S J Green; G Muyzer; Y Cohen; M Wagner; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

4.  Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine arctic sediments.

Authors:  K Ravenschlag; K Sahm; C Knoblauch; B B Jørgensen; R Amann
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

5.  Remarkable diversity of phototrophic purple bacteria in a permanently frozen Antarctic lake.

Authors:  Elizabeth A Karr; W Matthew Sattley; Deborah O Jung; Michael T Madigan; Laurie A Achenbach
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

6.  A gas vesiculate planktonic strain of the purple non-sulfur bacterium Rhodoferax antarcticus isolated from Lake Fryxell, Dry Valleys, Antarctica.

Authors:  Deborah O Jung; Laurie A Achenbach; Elizabeth A Karr; Shinichi Takaichi; Michael T Madigan
Journal:  Arch Microbiol       Date:  2004-08-31       Impact factor: 2.552

7.  16S rDNA diversity of cultured and uncultured prokaryotes of a mat sample from Lake Fryxell, McMurdo Dry Valleys, Antarctica.

Authors:  E Brambilla; H Hippe; A Hagelstein; B J Tindall; E Stackebrandt
Journal:  Extremophiles       Date:  2001-02       Impact factor: 2.395

8.  Development of oligonucleotide probes and PCR primers for detecting phylogenetic subgroups of sulfate-reducing bacteria.

Authors:  K Daly; R J Sharp; A J McCarthy
Journal:  Microbiology       Date:  2000-07       Impact factor: 2.777

9.  Sulfidogenesis from 2-aminoethanesulfonate (taurine) fermentation by a morphologically unusual sulfate-reducing bacterium, Desulforhopalus singaporensis sp. nov.

Authors:  T J Lie; M L Clawson; W Godchaux; E R Leadbetter
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

10.  Diversity and characterization of sulfate-reducing bacteria in groundwater at a uranium mill tailings site.

Authors:  Y J Chang; A D Peacock; P E Long; J R Stephen; J P McKinley; S J Macnaughton; A K Hussain; A M Saxton; D C White
Journal:  Appl Environ Microbiol       Date:  2001-07       Impact factor: 4.792

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  22 in total

1.  Isolation, characterization, and ecology of cold-active, chemolithotrophic, sulfur-oxidizing bacteria from perennially ice-covered Lake Fryxell, Antarctica.

Authors:  W Matthew Sattley; Michael T Madigan
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

2.  Cold-active chemoorganotrophic bacteria from permanently ice-covered Lake Hoare, McMurdo Dry Valleys, Antarctica.

Authors:  Kate M Clocksin; Deborah O Jung; Michael T Madigan
Journal:  Appl Environ Microbiol       Date:  2007-03-16       Impact factor: 4.792

3.  Biodiversity of methanogenic and other archaea in the permanently frozen Lake Fryxell, Antarctica.

Authors:  Elizabeth A Karr; Joshua M Ng; Sara M Belchik; W Matthew Sattley; Michael T Madigan; Laurie A Achenbach
Journal:  Appl Environ Microbiol       Date:  2006-02       Impact factor: 4.792

4.  Modular community structure suggests metabolic plasticity during the transition to polar night in ice-covered Antarctic lakes.

Authors:  Trista J Vick-Majors; John C Priscu; Linda A Amaral-Zettler
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5.  Temperature and nutrient induced responses of Lake Fryxell sulfate-reducing prokaryotes and description of Desulfovibrio lacusfryxellense, sp. nov., a pervasive, cold-active, sulfate-reducing bacterium from Lake Fryxell, Antarctica.

Authors:  W Matthew Sattley; Michael T Madigan
Journal:  Extremophiles       Date:  2010-05-15       Impact factor: 2.395

6.  Molecular analysis of the metabolic rates of discrete subsurface populations of sulfate reducers.

Authors:  M Miletto; K H Williams; A L N'Guessan; D R Lovley
Journal:  Appl Environ Microbiol       Date:  2011-07-15       Impact factor: 4.792

7.  Phylogenetic diversity of sulfate-reducing bacteria of sediments of Chilika Lake, India, determined through analysis of the dissimilatory sulfite reductase (dsr AB) gene.

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8.  Cultivation and characterization of snowbound microorganisms from the South Pole.

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Journal:  Extremophiles       Date:  2021-02-15       Impact factor: 2.395

9.  Characterization of a cold-active bacterium isolated from the South Pole "Ice Tunnel".

Authors:  Michael T Madigan; Megan L Kempher; Kelly S Bender; Paul Sullivan; W Matthew Sattley; Alice C Dohnalkova; Samantha B Joye
Journal:  Extremophiles       Date:  2017-07-05       Impact factor: 2.395

10.  A distinct pathway for tetrahymanol synthesis in bacteria.

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-19       Impact factor: 11.205

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