Literature DB >> 1619660

Contribution of the hydrophobic effect to globular protein stability.

C N Pace1.   

Abstract

The decrease in conformational stability, delta(delta G), has been measured for 72 aliphatic side-chain mutants from four proteins in which a larger side-chain is replaced by a smaller side-chain so that steric effects are minimal. When these delta(delta G) values are corrected to the same accessibility, namely 100% buried, then the following -delta(delta G) values per -CH2- group (in kcal/mol) are obtained: Ile----Val (1.26), Ala (1.26), Gly (1.26); Leu----Ala (1.16), Gly (1.21); Val----Ala (1.23), Gly (1.53). The average of these values is 1.27(+/- 0.07) kcal/mol. The 72 individual values range from 0 to 2.4 kcal/mol with an average value of 1.27(+/- 0.51) (standard deviation) kcal/mol. When the delta Gtr values from n-octanol to water are corrected for the difference in volume between the solutes and the solvents, the average value for the same substitutions is 1.25(+/- 0.05) kcal/mol. This suggests that proteins gain 1.3(+/- 0.5) kcal/mol in stability for each -CH2- group buried in folding, and, furthermore, that the volume corrected delta Gtr values for n-octanol for the amino acid side-chains provide good estimates of the contribution of the hydrophobic effect to globular protein stability.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1619660     DOI: 10.1016/0022-2836(92)90121-y

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  53 in total

1.  Thermal stability of hydrophobic heme pocket variants of oxidized cytochrome c.

Authors:  J R Liggins; T P Lo; G D Brayer; B T Nall
Journal:  Protein Sci       Date:  1999-12       Impact factor: 6.725

Review 2.  Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability.

Authors:  C Vieille; G J Zeikus
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

3.  Cavities of alpha(1)-antitrypsin that play structural and functional roles.

Authors:  C Lee; J S Maeng; J P Kocher; B Lee; M H Yu
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

4.  Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme.

Authors:  J Xu; W A Baase; M L Quillin; E P Baldwin; B W Matthews
Journal:  Protein Sci       Date:  2001-05       Impact factor: 6.725

Review 5.  How do helix-helix interactions help determine the folds of membrane proteins? Perspectives from the study of homo-oligomeric helical bundles.

Authors:  William F DeGrado; Holly Gratkowski; James D Lear
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

6.  Interatomic potentials and solvation parameters from protein engineering data for buried residues.

Authors:  Andrei L Lomize; Mikhail Y Reibarkh; Irina D Pogozheva
Journal:  Protein Sci       Date:  2002-08       Impact factor: 6.725

7.  Mutational analysis of differences in thermostability between histones from mesophilic and hyperthermophilic archaea.

Authors:  W T Li; J W Shriver; J N Reeve
Journal:  J Bacteriol       Date:  2000-02       Impact factor: 3.490

8.  Hydrophobic side-chain size is a determinant of the three-dimensional structure of the p53 oligomerization domain.

Authors:  M McCoy; E S Stavridi; J L Waterman; A M Wieczorek; S J Opella; T D Halazonetis
Journal:  EMBO J       Date:  1997-10-15       Impact factor: 11.598

Review 9.  Lessons in stability from thermophilic proteins.

Authors:  Abbas Razvi; J Martin Scholtz
Journal:  Protein Sci       Date:  2006-07       Impact factor: 6.725

10.  Protein destabilization by electrostatic repulsions in the two-stranded alpha-helical coiled-coil/leucine zipper.

Authors:  W D Kohn; C M Kay; R S Hodges
Journal:  Protein Sci       Date:  1995-02       Impact factor: 6.725

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.