Literature DB >> 10631980

Thermal stability of hydrophobic heme pocket variants of oxidized cytochrome c.

J R Liggins1, T P Lo, G D Brayer, B T Nall.   

Abstract

Microcalorimetry has been used to measure the stabilities of mutational variants of yeast iso-1 cytochrome c in which F82 and L85 have been replaced by other hydrophobic amino acids. Specifically, F82 has been replaced by Y and L85 by A. The double mutant F82Y,L85A iso-1 has also been studied, and the mutational perturbations are compared to those for the two single mutants, F82Y iso-1 and L85A iso-1. Results are interpreted in terms of known crystallographic structures. The data show that (1) the destabilization of the mutant proteins is similar in magnitude to that which is theoretically predicted by the more obvious mutation-induced structural effects; (2) the free energy of destabilization of the double mutant, F82Y,L85A iso-1, is less than the sum of those of the two single mutants, almost certainly because, in the double mutant, the -OH group of Y82 is able to protrude into the cavity formed by the L85A substitution. The more favorable structural accommodation of the new -OH group in the double mutant leads to additional stability through (1) further decreases in the volumes of internal cavities and (2) formation of an extra protein-protein hydrogen bond.

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Year:  1999        PMID: 10631980      PMCID: PMC2144223          DOI: 10.1110/ps.8.12.2645

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  52 in total

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Journal:  Biochemistry       Date:  1989-05-02       Impact factor: 3.162

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Journal:  Biochemistry       Date:  1992-02-18       Impact factor: 3.162

4.  Heat capacity of proteins. II. Partial molar heat capacity of the unfolded polypeptide chain of proteins: protein unfolding effects.

Authors:  P L Privalov; G I Makhatadze
Journal:  J Mol Biol       Date:  1990-05-20       Impact factor: 5.469

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Authors:  J W Ponder; F M Richards
Journal:  J Mol Biol       Date:  1987-02-20       Impact factor: 5.469

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Authors:  S D Pickett; M J Sternberg
Journal:  J Mol Biol       Date:  1993-06-05       Impact factor: 5.469

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Authors:  G D Rose; A R Geselowitz; G J Lesser; R H Lee; M H Zehfus
Journal:  Science       Date:  1985-08-30       Impact factor: 47.728

8.  Hydrophilicity of cavities in proteins.

Authors:  L Zhang; J Hermans
Journal:  Proteins       Date:  1996-04

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Authors:  J Xu; W A Baase; E Baldwin; B W Matthews
Journal:  Protein Sci       Date:  1998-01       Impact factor: 6.725

10.  Structural studies of the roles of residues 82 and 85 at the interactive face of cytochrome c.

Authors:  T P Lo; J G Guillemette; G V Louie; M Smith; G D Brayer
Journal:  Biochemistry       Date:  1995-01-10       Impact factor: 3.162

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  4 in total

1.  Cytochrome c folds through a smooth funnel.

Authors:  M Panda; M G Benavides-Garcia; M M Pierce; B T Nall
Journal:  Protein Sci       Date:  2000-03       Impact factor: 6.725

2.  Redox-dependent stability, protonation, and reactivity of cysteine-bound heme proteins.

Authors:  Fangfang Zhong; George P Lisi; Daniel P Collins; John H Dawson; Ekaterina V Pletneva
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-07       Impact factor: 11.205

Review 3.  The role of key residues in structure, function, and stability of cytochrome-c.

Authors:  Sobia Zaidi; Md Imtaiyaz Hassan; Asimul Islam; Faizan Ahmad
Journal:  Cell Mol Life Sci       Date:  2013-04-25       Impact factor: 9.261

4.  Comparison of the backbone dynamics of wild-type Hydrogenobacter thermophilus cytochrome c(552) and its b-type variant.

Authors:  Kaeko Tozawa; Stuart J Ferguson; Christina Redfield; Lorna J Smith
Journal:  J Biomol NMR       Date:  2015-05-08       Impact factor: 2.835

  4 in total

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