Literature DB >> 16184035

Molecular testing of multiple HIV-1 transmissions in a criminal case.

Philippe Lemey1, Sonia Van Dooren, Kristel Van Laethem, Yoeri Schrooten, Inge Derdelinckx, Patrick Goubau, Francoise Brun-Vézinet, Dolores Vaira, Anne-Mieke Vandamme.   

Abstract

OBJECTIVE: To test the a priori hypothesis of HIV-1 transmission from one suspect to six recipients in a criminal case.
METHODS: Partial pol and/or env sequences were obtained for at least two samples of the suspect and the victims. Appropriate local controls were sampled based on epidemiological and subtype criteria. Phylogenetic testing was performed using different reconstruction methods.
RESULTS: Phylogenetic analyses consistently inferred a monophyletic cluster for the suspect and victim samples in both genome regions. This was highly supported by parametric and non-parametric bootstrapping techniques. Moreover, the controls most closely related to the suspect-victim cluster had a similar geographical origin to the suspect.
CONCLUSIONS: Taking into account the limitations on the conclusions that can be drawn from molecular investigations we could infer that our molecular data is consistent with a scenario of multiple HIV transmission between suspect and victims.

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Year:  2005        PMID: 16184035     DOI: 10.1097/01.aids.0000187904.02261.1a

Source DB:  PubMed          Journal:  AIDS        ISSN: 0269-9370            Impact factor:   4.177


  20 in total

1.  Source identification in two criminal cases using phylogenetic analysis of HIV-1 DNA sequences.

Authors:  Diane I Scaduto; Jeremy M Brown; Wade C Haaland; Derrick J Zwickl; David M Hillis; Michael L Metzker
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-15       Impact factor: 11.205

2.  Phylogenetically resolving epidemiologic linkage.

Authors:  Ethan O Romero-Severson; Ingo Bulla; Thomas Leitner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-22       Impact factor: 11.205

Review 3.  Expansion of Microbial Forensics.

Authors:  Sarah E Schmedes; Antti Sajantila; Bruce Budowle
Journal:  J Clin Microbiol       Date:  2016-02-24       Impact factor: 5.948

4.  Regional spread of HIV-1 M subtype B in middle-aged patients by random env-C2V4 region sequencing.

Authors:  Martin Stürmer; Katrin Zimmermann; Carlos Fritzsche; Emil Reisinger; Gottfried Doelken; Annemarie Berger; Hans W Doerr; Josef Eberle; Lutz G Gürtler
Journal:  Med Microbiol Immunol       Date:  2010-03-09       Impact factor: 3.402

5.  Putting it all together: lessons from the Jackson HIV outbreak investigation.

Authors:  Christopher B Hurt; Ann M Dennis
Journal:  Sex Transm Dis       Date:  2013-03       Impact factor: 2.830

Review 6.  Phylogenetic studies of transmission dynamics in generalized HIV epidemics: an essential tool where the burden is greatest?

Authors:  Ann M Dennis; Joshua T Herbeck; Andrew L Brown; Paul Kellam; Tulio de Oliveira; Deenan Pillay; Christophe Fraser; Myron S Cohen
Journal:  J Acquir Immune Defic Syndr       Date:  2014-10-01       Impact factor: 3.731

Review 7.  Ethical considerations in global HIV phylogenetic research.

Authors:  Cordelia E M Coltart; Anne Hoppe; Michael Parker; Liza Dawson; Joseph J Amon; Musonda Simwinga; Gail Geller; Gail Henderson; Oliver Laeyendecker; Joseph D Tucker; Patrick Eba; Vladimir Novitsky; Anne-Mieke Vandamme; Janet Seeley; Gina Dallabetta; Guy Harling; M Kate Grabowski; Peter Godfrey-Faussett; Christophe Fraser; Myron S Cohen; Deenan Pillay
Journal:  Lancet HIV       Date:  2018-08-30       Impact factor: 12.767

Review 8.  The evolution of HIV: inferences using phylogenetics.

Authors:  Eduardo Castro-Nallar; Marcos Pérez-Losada; Gregory F Burton; Keith A Crandall
Journal:  Mol Phylogenet Evol       Date:  2011-11-27       Impact factor: 4.286

9.  Using HIV transmission networks to investigate community effects in HIV prevention trials.

Authors:  Joel O Wertheim; Sergei L Kosakovsky Pond; Susan J Little; Victor De Gruttola
Journal:  PLoS One       Date:  2011-11-16       Impact factor: 3.240

10.  Molecular evolution in court: analysis of a large hepatitis C virus outbreak from an evolving source.

Authors:  Fernando González-Candelas; María Alma Bracho; Borys Wróbel; Andrés Moya
Journal:  BMC Biol       Date:  2013-07-19       Impact factor: 7.431

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