Literature DB >> 16170627

Characterizing the chromosomes of the Australian model marsupial Macropus eugenii (tammar wallaby).

Amber E Alsop1, Pat Miethke, Ruth Rofe, Edda Koina, Natasha Sankovic, Janine E Deakin, Helen Haines, Robert W Rapkins, Jennifer A Marshall Graves.   

Abstract

Marsupials occupy a phylogenetic middle ground that is very valuable in genome comparisons of mammal and other vertebrate species. For this reason, whole genome sequencing is being undertaken for two distantly related marsupial species, including the model kangaroo species Macropus eugenii (the tammar wallaby). As a first step towards the molecular characterization of the tammar genome, we present a detailed description of the tammar karyotype, report the development of a set of molecular anchor markers and summarize the comparative mapping data for this species.

Entities:  

Mesh:

Year:  2005        PMID: 16170627     DOI: 10.1007/s10577-005-0989-2

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  20 in total

Review 1.  The kangaroo genome. Leaps and bounds in comparative genomics.

Authors:  Matthew J Wakefield; Jennifer A Marshall Graves
Journal:  EMBO Rep       Date:  2003-02       Impact factor: 8.807

2.  Comparative genome organization of vertebrates. The First International Workshop on Comparative Genome Organization.

Authors:  L Andersson; A Archibald; M Ashburner; S Audun; W Barendse; J Bitgood; C Bottema; T Broad; S Brown; D Burt; C Charlier; N Copeland; S Davis; M Davisson; J Edwards; A Eggen; G Elgar; J T Eppig; I Franklin; P Grewe; T Gill; J A Graves; R Hawken; J Hetzel; J Womack
Journal:  Mamm Genome       Date:  1996-10       Impact factor: 2.957

3.  Histone underacetylation is an ancient component of mammalian X chromosome inactivation.

Authors:  M J Wakefield; A M Keohane; B M Turner; J A Graves
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

4.  The relationship between position and expression of genes on the kangaroo X chromosome suggests a tissue-specific spread of inactivation from a single control site.

Authors:  J A Graves; G W Dawson
Journal:  Genet Res       Date:  1988-04       Impact factor: 1.588

5.  Late DNA replication in the paternally derived X chromosome of female kangaroos.

Authors:  G B Sharman
Journal:  Nature       Date:  1971-03-26       Impact factor: 49.962

6.  Shared DNA sequences between the X and Y chromosomes in the tammar wallaby - evidence for independent additions to eutherian and marsupial sex chromosomes.

Authors:  R Toder; J Wienberg; L Voullaire; P C O'Brien; P Maccarone; J A Graves
Journal:  Chromosoma       Date:  1997-07       Impact factor: 4.316

7.  The Oxford Grid.

Authors:  J H Edwards
Journal:  Ann Hum Genet       Date:  1991-01       Impact factor: 1.670

8.  The minimal mammalian Y chromosome - the marsupial Y as a model system.

Authors:  R Toder; M J Wakefield; J A Graves
Journal:  Cytogenet Cell Genet       Date:  2000

9.  G-banding evidence for a conserved complement in the Marsupialia.

Authors:  R Rofe; D Hayman
Journal:  Cytogenet Cell Genet       Date:  1985

10.  Reversal and convergence in marsupial chromosome evolution.

Authors:  W Rens; P C M O'Brien; H Fairclough; L Harman; J A M Graves; M A Ferguson-Smith
Journal:  Cytogenet Genome Res       Date:  2003       Impact factor: 1.636

View more
  28 in total

1.  Does the human X contain a third evolutionary block? Origin of genes on human Xp11 and Xq28.

Authors:  Margaret L Delbridge; Hardip R Patel; Paul D Waters; Daniel A McMillan; Jennifer A Marshall Graves
Journal:  Genome Res       Date:  2009-05-13       Impact factor: 9.043

2.  Specific patterns of histone marks accompany X chromosome inactivation in a marsupial.

Authors:  Edda Koina; Julie Chaumeil; Ian K Greaves; David J Tremethick; Jennifer A Marshall Graves
Journal:  Chromosome Res       Date:  2009-02-13       Impact factor: 5.239

3.  Identification of natural killer cell receptor clusters in the platypus genome reveals an expansion of C-type lectin genes.

Authors:  Emily S W Wong; Claire E Sanderson; Janine E Deakin; Camilla M Whittington; Anthony T Papenfuss; Katherine Belov
Journal:  Immunogenetics       Date:  2009-07-14       Impact factor: 2.846

4.  The methylation and telomere landscape in two families of marsupials with different rates of chromosome evolution.

Authors:  Emory D Ingles; Janine E Deakin
Journal:  Chromosome Res       Date:  2018-12-12       Impact factor: 5.239

5.  A first-generation integrated tammar wallaby map and its use in creating a tammar wallaby first-generation virtual genome map.

Authors:  Chenwei Wang; Janine E Deakin; Willem Rens; Kyall R Zenger; Katherine Belov; Jennifer A Marshall Graves; Frank W Nicholas
Journal:  BMC Genomics       Date:  2011-08-19       Impact factor: 3.969

6.  The region homologous to the X-chromosome inactivation centre has been disrupted in marsupial and monotreme mammals.

Authors:  Timothy A Hore; Edda Koina; Matthew J Wakefield; Jennifer A Marshall Graves
Journal:  Chromosome Res       Date:  2007-03-05       Impact factor: 5.239

7.  Physical map of two tammar wallaby chromosomes: a strategy for mapping in non-model mammals.

Authors:  Janine E Deakin; Edda Koina; Paul D Waters; Ruth Doherty; Vidushi S Patel; Margaret L Delbridge; Bianca Dobson; James Fong; Yanqiu Hu; Cecilia van den Hurk; Andrew J Pask; Geoff Shaw; Carly Smith; Katherine Thompson; Matthew J Wakefield; Hongshi Yu; Marilyn B Renfree; Jennifer A Marshall Graves
Journal:  Chromosome Res       Date:  2008-11-08       Impact factor: 5.239

8.  Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes.

Authors:  Frédéric Veyrunes; Paul D Waters; Pat Miethke; Willem Rens; Daniel McMillan; Amber E Alsop; Frank Grützner; Janine E Deakin; Camilla M Whittington; Kyriena Schatzkamer; Colin L Kremitzki; Tina Graves; Malcolm A Ferguson-Smith; Wes Warren; Jennifer A Marshall Graves
Journal:  Genome Res       Date:  2008-05-07       Impact factor: 9.043

9.  Defensins and the convergent evolution of platypus and reptile venom genes.

Authors:  Camilla M Whittington; Anthony T Papenfuss; Paramjit Bansal; Allan M Torres; Emily S W Wong; Janine E Deakin; Tina Graves; Amber Alsop; Kyriena Schatzkamer; Colin Kremitzki; Chris P Ponting; Peter Temple-Smith; Wesley C Warren; Philip W Kuchel; Katherine Belov
Journal:  Genome Res       Date:  2008-05-07       Impact factor: 9.043

Review 10.  Marsupials as models for understanding the role of chromosome rearrangements in evolution and disease.

Authors:  Janine E Deakin; Maya Kruger-Andrzejewska
Journal:  Chromosoma       Date:  2016-06-03       Impact factor: 4.316

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.