Literature DB >> 19214764

Specific patterns of histone marks accompany X chromosome inactivation in a marsupial.

Edda Koina1, Julie Chaumeil, Ian K Greaves, David J Tremethick, Jennifer A Marshall Graves.   

Abstract

The inactivation of one of the two X chromosomes in female placental mammals represents a remarkable example of epigenetic silencing. X inactivation occurs also in marsupial mammals, but is phenotypically different, being incomplete, tissue-specific and paternal. Paternal X inactivation occurs also in the extraembryonic cells of rodents, suggesting that imprinted X inactivation represents a simpler ancestral mechanism. This evolved into a complex and random process in placental mammals under the control of the XIST gene, involving notably variant and modified histones. Molecular mechanisms of X inactivation in marsupials are poorly known, but occur in the absence of an XIST homologue. We analysed the specific pattern of histone modifications using immunofluorescence on metaphasic chromosomes of a model kangaroo, the tammar wallaby. We found that all active marks are excluded from the inactive X in marsupials, as in placental mammals, so this represents a common feature of X inactivation throughout mammals. However, we were unable to demonstrate the accumulation of inactive histone marks, suggesting some fundamental differences in the molecular mechanism of X inactivation between marsupial and placental mammals. A better understanding of the epigenetic mechanisms underlying X inactivation in marsupials will provide important insights into the evolution of this complex process.

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Year:  2009        PMID: 19214764     DOI: 10.1007/s10577-009-9020-7

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  60 in total

1.  Epigenetic dynamics of imprinted X inactivation during early mouse development.

Authors:  Ikuhiro Okamoto; Arie P Otte; C David Allis; Danny Reinberg; Edith Heard
Journal:  Science       Date:  2003-12-11       Impact factor: 47.728

2.  Integrated kinetics of X chromosome inactivation in differentiating embryonic stem cells.

Authors:  J Chaumeil; I Okamoto; M Guggiari; E Heard
Journal:  Cytogenet Genome Res       Date:  2002       Impact factor: 1.636

3.  X-Inactivation and histone H4 acetylation in embryonic stem cells.

Authors:  A M Keohane; L P O'neill; N D Belyaev; J S Lavender; B M Turner
Journal:  Dev Biol       Date:  1996-12-15       Impact factor: 3.582

4.  Histone underacetylation is an ancient component of mammalian X chromosome inactivation.

Authors:  M J Wakefield; A M Keohane; B M Turner; J A Graves
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

5.  The relationship between position and expression of genes on the kangaroo X chromosome suggests a tissue-specific spread of inactivation from a single control site.

Authors:  J A Graves; G W Dawson
Journal:  Genet Res       Date:  1988-04       Impact factor: 1.588

6.  Late DNA replication in the paternally derived X chromosome of female kangaroos.

Authors:  G B Sharman
Journal:  Nature       Date:  1971-03-26       Impact factor: 49.962

7.  X-inactivation profile reveals extensive variability in X-linked gene expression in females.

Authors:  Laura Carrel; Huntington F Willard
Journal:  Nature       Date:  2005-03-17       Impact factor: 49.962

8.  Shared DNA sequences between the X and Y chromosomes in the tammar wallaby - evidence for independent additions to eutherian and marsupial sex chromosomes.

Authors:  R Toder; J Wienberg; L Voullaire; P C O'Brien; P Maccarone; J A Graves
Journal:  Chromosoma       Date:  1997-07       Impact factor: 4.316

9.  DNA methylation stabilizes X chromosome inactivation in eutherians but not in marsupials: evidence for multistep maintenance of mammalian X dosage compensation.

Authors:  D C Kaslow; B R Migeon
Journal:  Proc Natl Acad Sci U S A       Date:  1987-09       Impact factor: 11.205

10.  Mammalian X chromosome inactivation: testing the hypothesis of transcriptional control.

Authors:  J A Graves; S M Gartler
Journal:  Somat Cell Mol Genet       Date:  1986-05
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  27 in total

Review 1.  The origin and evolution of vertebrate sex chromosomes and dosage compensation.

Authors:  A M Livernois; J A M Graves; P D Waters
Journal:  Heredity (Edinb)       Date:  2011-11-16       Impact factor: 3.821

2.  Epigenetic modifications on X chromosomes in marsupial and monotreme mammals and implications for evolution of dosage compensation.

Authors:  Willem Rens; Margaret S Wallduck; Frances L Lovell; Malcolm A Ferguson-Smith; Anne C Ferguson-Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-22       Impact factor: 11.205

Review 3.  Nuclear organization and dosage compensation.

Authors:  Jennifer C Chow; Edith Heard
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-10-13       Impact factor: 10.005

Review 4.  Weird mammals provide insights into the evolution of mammalian sex chromosomes and dosage compensation.

Authors:  Jennifer A Marshall Graves
Journal:  J Genet       Date:  2015-12       Impact factor: 1.166

Review 5.  Evolution of vertebrate sex chromosomes and dosage compensation.

Authors:  Jennifer A Marshall Graves
Journal:  Nat Rev Genet       Date:  2015-11-30       Impact factor: 53.242

6.  Clcn4-2 genomic structure differs between the X locus in Mus spretus and the autosomal locus in Mus musculus: AT motif enrichment on the X.

Authors:  Di Kim Nguyen; Fan Yang; Rajinder Kaul; Can Alkan; Anthony Antonellis; Karen F Friery; Baoli Zhu; Pieter J de Jong; Christine M Disteche
Journal:  Genome Res       Date:  2011-01-31       Impact factor: 9.043

Review 7.  Lessons from comparative analysis of X-chromosome inactivation in mammals.

Authors:  Ikuhiro Okamoto; Edith Heard
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

8.  The methylation and telomere landscape in two families of marsupials with different rates of chromosome evolution.

Authors:  Emory D Ingles; Janine E Deakin
Journal:  Chromosome Res       Date:  2018-12-12       Impact factor: 5.239

Review 9.  Disordered proteinaceous machines.

Authors:  Monika Fuxreiter; Ágnes Tóth-Petróczy; Daniel A Kraut; Andreas Matouschek; Andreas T Matouschek; Roderick Y H Lim; Bin Xue; Lukasz Kurgan; Vladimir N Uversky
Journal:  Chem Rev       Date:  2014-04-04       Impact factor: 60.622

10.  Histone H3 trimethylation at lysine 9 marks the inactive metaphase X chromosome in the marsupial Monodelphis domestica.

Authors:  Irina S Zakharova; Alexander I Shevchenko; Alexander G Shilov; Tatyana B Nesterova; John L Vandeberg; Suren M Zakian
Journal:  Chromosoma       Date:  2010-11-26       Impact factor: 4.316

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