Literature DB >> 16159208

A tightly regulated molecular motor based upon T7 RNA polymerase.

Richard T Pomerantz1, Ravi Ramjit, Zoher Gueroui, Christophe Place, Michael Anikin, Sanford Leuba, Jordanka Zlatanova, William T McAllister.   

Abstract

Controlled movement of materials or molecules within the nanometer range is essential in many applications of nanotechnology. Here we report the capture, movement, and release of cargo molecules along DNA by a modified form of T7 RNA polymerase (RNAP) in a manner that is controlled by the sequence of the DNA. Using single-molecule methods, we visualize the assembly and manipulation of nanodevices and the ability to harness rotary and linear forces of the RNAP motor.

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Year:  2005        PMID: 16159208     DOI: 10.1021/nl0509125

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  11 in total

1.  Magnetic tweezers measurement of single molecule torque.

Authors:  Alfredo Celedon; Ilana M Nodelman; Bridget Wildt; Rohit Dewan; Peter Searson; Denis Wirtz; Gregory D Bowman; Sean X Sun
Journal:  Nano Lett       Date:  2009-04       Impact factor: 11.189

2.  Nucleosome assembly depends on the torsion in the DNA molecule: a magnetic tweezers study.

Authors:  Pooja Gupta; Jordanka Zlatanova; Miroslav Tomschik
Journal:  Biophys J       Date:  2009-12-16       Impact factor: 4.033

3.  Counting of six pRNAs of phi29 DNA-packaging motor with customized single-molecule dual-view system.

Authors:  Dan Shu; Hui Zhang; Jiashun Jin; Peixuan Guo
Journal:  EMBO J       Date:  2007-01-24       Impact factor: 11.598

4.  Molecular propulsion: chemical sensing and chemotaxis of DNA driven by RNA polymerase.

Authors:  Hua Yu; Kyubong Jo; Kristy L Kounovsky; Juan J de Pablo; David C Schwartz
Journal:  J Am Chem Soc       Date:  2009-04-29       Impact factor: 15.419

Review 5.  Structure and dynamics of single DNA molecules manipulated by magnetic tweezers and or flow.

Authors:  Sanford H Leuba; Travis B Wheeler; Chao-Min Cheng; Philip R LeDuc; Mónica Fernández-Sierra; Edwin Quiñones
Journal:  Methods       Date:  2008-11-17       Impact factor: 3.608

6.  Direct and random routing of a molecular motor protein at a DNA junction.

Authors:  Louise K Stanley; Mark D Szczelkun
Journal:  Nucleic Acids Res       Date:  2006-08-26       Impact factor: 16.971

7.  Identification of proteins associated with the yeast mitochondrial RNA polymerase by tandem affinity purification.

Authors:  Dmitriy A Markov; Maria Savkina; Michael Anikin; Mark Del Campo; Karen Ecker; Alan M Lambowitz; Jon P De Gnore; William T McAllister
Journal:  Yeast       Date:  2009-08       Impact factor: 3.239

8.  Single-molecule analysis of 1D diffusion and transcription elongation of T7 RNA polymerase along individual stretched DNA molecules.

Authors:  Ji Hoon Kim; Ronald G Larson
Journal:  Nucleic Acids Res       Date:  2007-05-25       Impact factor: 16.971

Review 9.  Viral nanomotors for packaging of dsDNA and dsRNA.

Authors:  Peixuan Guo; Tae Jin Lee
Journal:  Mol Microbiol       Date:  2007-05       Impact factor: 3.501

Review 10.  Computational simulation strategies for analysis of multisubunit RNA polymerases.

Authors:  Beibei Wang; Michael Feig; Robert I Cukier; Zachary F Burton
Journal:  Chem Rev       Date:  2013-08-29       Impact factor: 60.622

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