Literature DB >> 16155207

Structure of the nuclease domain of ribonuclease III from M. tuberculosis at 2.1 A.

David L Akey1, James M Berger.   

Abstract

RNase III enzymes are a highly conserved family of proteins that specifically cleave double-stranded (ds)RNA. These proteins are involved in a diverse group of functions, including ribosomal RNA processing, mRNA maturation and decay, snRNA and snoRNA processing, and RNA interference. Here we report the crystal structure of the nuclease domain of RNase III from the pathogen Mycobacterium tuberculosis. Although globally similar to other RNase III folds, this structure has some features not observed in previously reported models. These include the presence of an additional metal ion near the catalytic site, as well as conserved secondary structural elements that are proposed to have functional roles in the recognition of dsRNAs.

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Year:  2005        PMID: 16155207      PMCID: PMC2253305          DOI: 10.1110/ps.051665905

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  27 in total

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4.  Noncatalytic assembly of ribonuclease III with double-stranded RNA.

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Journal:  Structure       Date:  2004-03       Impact factor: 5.006

5.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

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Authors:  W Sun; A W Nicholson
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8.  Bacillus subtilis RNase III gene: cloning, function of the gene in Escherichia coli, and construction of Bacillus subtilis strains with altered rnc loci.

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Journal:  J Bacteriol       Date:  1997-12       Impact factor: 3.490

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10.  Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin.

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  14 in total

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3.  The inside-out mechanism of Dicers from budding yeasts.

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4.  YmdB: a stress-responsive ribonuclease-binding regulator of E. coli RNase III activity.

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5.  Structure of the human Dicer-TRBP complex by electron microscopy.

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Review 6.  Use of siRNA molecular beacons to detect and attenuate mycobacterial infection in macrophages.

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Review 7.  Bacterial ribonucleases and their roles in RNA metabolism.

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8.  Characterization of Aquifex aeolicus ribonuclease III and the reactivity epitopes of its pre-ribosomal RNA substrates.

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9.  Characterization of RNA sequence determinants and antideterminants of processing reactivity for a minimal substrate of Escherichia coli ribonuclease III.

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10.  Combined computational and experimental analysis of a complex of ribonuclease III and the regulatory macrodomain protein, YmdB.

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Journal:  Proteins       Date:  2015-01-21
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