Literature DB >> 16143513

Prospects for glycoinformatics.

Serge Pérez1, Barbara Mulloy.   

Abstract

High-throughput and automated techniques (mass spectrometry in particular) allow increasingly rapid structural analysis of complex glycans. Information concerning the primary structure (composition, sequence and linkages), three-dimensional structure (including dynamics) and interactions of glycans is now available in sufficient quantity to justify the maintenance of databases and search facilities. Several such resources (both commercial and open access) are now available as web tools. To derive the full value of glycan databases, it will be necessary to develop a universally accepted machine-readable structural representation of glycans.

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Year:  2005        PMID: 16143513     DOI: 10.1016/j.sbi.2005.08.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  8 in total

Review 1.  Harnessing glycomics technologies: integrating structure with function for glycan characterization.

Authors:  Luke N Robinson; Charlermchai Artpradit; Rahul Raman; Zachary H Shriver; Mathuros Ruchirawat; Ram Sasisekharan
Journal:  Electrophoresis       Date:  2012-03       Impact factor: 3.535

2.  Informatics Ecosystems to Advance the Biology of Glycans.

Authors:  Lewis J Frey
Journal:  Methods Mol Biol       Date:  2022

Review 3.  Heparan sulfate and heparin interactions with proteins.

Authors:  Maria C Z Meneghetti; Ashley J Hughes; Timothy R Rudd; Helena B Nader; Andrew K Powell; Edwin A Yates; Marcelo A Lima
Journal:  J R Soc Interface       Date:  2015-09-06       Impact factor: 4.118

4.  Shape: automatic conformation prediction of carbohydrates using a genetic algorithm.

Authors:  Jimmy Rosen; Laurence Miguet; Serge Pérez
Journal:  J Cheminform       Date:  2009-09-21       Impact factor: 5.514

Review 5.  Bioinformatics and molecular modeling in glycobiology.

Authors:  Martin Frank; Siegfried Schloissnig
Journal:  Cell Mol Life Sci       Date:  2010-04-04       Impact factor: 9.261

Review 6.  Determination of glycosylation sites and site-specific heterogeneity in glycoproteins.

Authors:  Hyun Joo An; John W Froehlich; Carlito B Lebrilla
Journal:  Curr Opin Chem Biol       Date:  2009-08-21       Impact factor: 8.822

7.  The use of glycoinformatics in glycochemistry.

Authors:  Thomas Lütteke
Journal:  Beilstein J Org Chem       Date:  2012-06-21       Impact factor: 2.883

Review 8.  Insights into Bioinformatic Applications for Glycosylation: Instigating an Awakening towards Applying Glycoinformatic Resources for Cancer Diagnosis and Therapy.

Authors:  Manikandan Muthu; Sechul Chun; Judy Gopal; Vimala Anthonydhason; Steve W Haga; Anna Jacintha Prameela Devadoss; Jae-Wook Oh
Journal:  Int J Mol Sci       Date:  2020-12-08       Impact factor: 5.923

  8 in total

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