Literature DB >> 19700364

Determination of glycosylation sites and site-specific heterogeneity in glycoproteins.

Hyun Joo An1, John W Froehlich, Carlito B Lebrilla.   

Abstract

Glycosylation is one of the most common post-translational modifications (PTMs) of proteins. At least 50% of human proteins are glycosylated with some estimates being as high as 70%. Glycoprotein analysis requires determining both the sites of glycosylation as well as the glycan structures associated with each site. Recent advances have led to the development of new analytical methods that employ mass spectrometry extensively making it possible to obtain the glycosylation site and the site microheterogeneity. These tools will be important for the eventual development of glycoproteomics.

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Year:  2009        PMID: 19700364      PMCID: PMC2749913          DOI: 10.1016/j.cbpa.2009.07.022

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  45 in total

1.  Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry.

Authors:  Hui Zhang; Xiao-Jun Li; Daniel B Martin; Ruedi Aebersold
Journal:  Nat Biotechnol       Date:  2003-05-18       Impact factor: 54.908

2.  Screening for N-glycosylated proteins by liquid chromatography mass spectrometry.

Authors:  Jakob Bunkenborg; Bartosz J Pilch; Alexandre V Podtelejnikov; Jacek R Wiśniewski
Journal:  Proteomics       Date:  2004-02       Impact factor: 3.984

3.  Using optimized collision energies and high resolution, high accuracy fragment ion selection to improve glycopeptide detection by precursor ion scanning.

Authors:  Judith Jebanathirajah; Hanno Steen; Peter Roepstorff
Journal:  J Am Soc Mass Spectrom       Date:  2003-07       Impact factor: 3.109

4.  Combined electron capture and infrared multiphoton dissociation for multistage MS/MS in a Fourier transform ion cyclotron resonance mass spectrometer.

Authors:  Kristina Håkansson; Michael J Chalmers; John P Quinn; Melinda A McFarland; Christopher L Hendrickson; Alan G Marshall
Journal:  Anal Chem       Date:  2003-07-01       Impact factor: 6.986

Review 5.  Prospects for glycoinformatics.

Authors:  Serge Pérez; Barbara Mulloy
Journal:  Curr Opin Struct Biol       Date:  2005-10       Impact factor: 6.809

6.  Electron capture dissociation and infrared multiphoton dissociation MS/MS of an N-glycosylated tryptic peptic to yield complementary sequence information.

Authors:  K Håkansson; H J Cooper; M R Emmett; C E Costello; A G Marshall; C L Nilsson
Journal:  Anal Chem       Date:  2001-09-15       Impact factor: 6.986

7.  A new strategy for identification of N-glycosylated proteins and unambiguous assignment of their glycosylation sites using HILIC enrichment and partial deglycosylation.

Authors:  Per Hägglund; Jakob Bunkenborg; Felix Elortza; Ole Nørregaard Jensen; Peter Roepstorff
Journal:  J Proteome Res       Date:  2004 May-Jun       Impact factor: 4.466

8.  Determination of N-glycosylation sites and site heterogeneity in glycoproteins.

Authors:  Hyun Joo An; Thomas R Peavy; Jerry L Hedrick; Carlito B Lebrilla
Journal:  Anal Chem       Date:  2003-10-15       Impact factor: 6.986

9.  A method for proteomic identification of membrane-bound proteins containing Asn-linked oligosaccharides.

Authors:  Xiaolian Fan; Yi-Min She; Rick D Bagshaw; John W Callahan; Harry Schachter; Don J Mahuran
Journal:  Anal Biochem       Date:  2004-09-01       Impact factor: 3.365

10.  Precursor ion scanning for detection and structural characterization of heterogeneous glycopeptide mixtures.

Authors:  Mark A Ritchie; Andrew C Gill; Michael J Deery; Kathryn Lilley
Journal:  J Am Soc Mass Spectrom       Date:  2002-09       Impact factor: 3.109

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  84 in total

1.  Improved mass spectrometric characterization of protein glycosylation reveals unusual glycosylation of maize-derived bovine trypsin.

Authors:  Hao Zhang; Richard Y C Huang; Pegah R Jalili; Janet W Irungu; Gordon R Nicol; Kevin B Ray; Henry W Rohrs; Michael L Gross
Journal:  Anal Chem       Date:  2010-11-15       Impact factor: 6.986

2.  Enhanced detection and identification of glycopeptides in negative ion mode mass spectrometry.

Authors:  Charles C Nwosu; John S Strum; Hyun Joo An; Carlito B Lebrilla
Journal:  Anal Chem       Date:  2010-11-04       Impact factor: 6.986

Review 3.  Breast milk oligosaccharides: structure-function relationships in the neonate.

Authors:  Jennifer T Smilowitz; Carlito B Lebrilla; David A Mills; J Bruce German; Samara L Freeman
Journal:  Annu Rev Nutr       Date:  2014-05-15       Impact factor: 11.848

4.  Comparison of Glycopeptide Fragmentation by Collision Induced Dissociation and Ultraviolet Photodissociation.

Authors:  Byoung Joon Ko; Jennifer S Brodbelt
Journal:  Int J Mass Spectrom       Date:  2015-02-01       Impact factor: 1.986

5.  A comparison of energy-resolved vibrational activation/dissociation characteristics of protonated and sodiated high mannose N-glycopeptides.

Authors:  Forouzan Aboufazeli; Venkata Kolli; Eric D Dodds
Journal:  J Am Soc Mass Spectrom       Date:  2015-01-13       Impact factor: 3.109

Review 6.  Global and site-specific analysis of protein glycosylation in complex biological systems with Mass Spectrometry.

Authors:  Haopeng Xiao; Fangxu Sun; Suttipong Suttapitugsakul; Ronghu Wu
Journal:  Mass Spectrom Rev       Date:  2019-01-03       Impact factor: 10.946

7.  Counterion Optimization Dramatically Improves Selectivity for Phosphopeptides and Glycopeptides in Electrostatic Repulsion-Hydrophilic Interaction Chromatography.

Authors:  Yusi Cui; Dylan Nicholas Tabang; Zishan Zhang; Min Ma; Andrew J Alpert; Lingjun Li
Journal:  Anal Chem       Date:  2021-05-27       Impact factor: 6.986

8.  Quantification of glycopeptides by multiple reaction monitoring liquid chromatography/tandem mass spectrometry.

Authors:  Ehwang Song; Swetha Pyreddy; Yehia Mechref
Journal:  Rapid Commun Mass Spectrom       Date:  2012-09-15       Impact factor: 2.419

9.  Integrated Proteomic and Glycoproteomic Analyses of Prostate Cancer Cells Reveal Glycoprotein Alteration in Protein Abundance and Glycosylation.

Authors:  Punit Shah; Xiangchun Wang; Weiming Yang; Shadi Toghi Eshghi; Shisheng Sun; Naseruddin Hoti; Lijun Chen; Shuang Yang; Jered Pasay; Abby Rubin; Hui Zhang
Journal:  Mol Cell Proteomics       Date:  2015-08-09       Impact factor: 5.911

10.  Reliable determination of site-specific in vivo protein N-glycosylation based on collision-induced MS/MS and chromatographic retention time.

Authors:  Benlian Wang; Yaroslav Tsybovsky; Krzysztof Palczewski; Mark R Chance
Journal:  J Am Soc Mass Spectrom       Date:  2014-02-19       Impact factor: 3.109

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