Literature DB >> 16142218

TRBP, a regulator of cellular PKR and HIV-1 virus expression, interacts with Dicer and functions in RNA silencing.

Astrid D Haase1, Lukasz Jaskiewicz, Haidi Zhang, Sébastien Lainé, Ragna Sack, Anne Gatignol, Witold Filipowicz.   

Abstract

Dicer is a key enzyme involved in RNA interference (RNAi) and microRNA (miRNA) pathways. It is required for biogenesis of miRNAs and small interfering RNAs (siRNAs), and also has a role in the effector steps of RNA silencing. Apart from Argonautes, no proteins are known to associate with Dicer in mammalian cells. In this work, we describe the identification of TRBP (human immunodeficiency virus (HIV-1) transactivating response (TAR) RNA-binding protein) as a protein partner of human Dicer. We show that TRBP is required for optimal RNA silencing mediated by siRNAs and endogenous miRNAs, and that it facilitates cleavage of pre-miRNA in vitro. TRBP had previously been assigned several functions, including inhibition of the interferon-induced double-stranded RNA-regulated protein kinase PKR and modulation of HIV-1 gene expression by association with TAR. The TRBP-Dicer interaction shown raises interesting questions about the potential interplay between RNAi and interferon-PKR pathways.

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Year:  2005        PMID: 16142218      PMCID: PMC1369185          DOI: 10.1038/sj.embor.7400509

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  24 in total

1.  Two dimerization domains in the trans-activation response RNA-binding protein (TRBP) individually reverse the protein kinase R inhibition of HIV-1 long terminal repeat expression.

Authors:  A Daher; M Longuet; D Dorin; F Bois; E Segeral; S Bannwarth; P L Battisti; D F Purcell; R Benarous; C Vaquero; E F Meurs; A Gatignol
Journal:  J Biol Chem       Date:  2001-07-03       Impact factor: 5.157

2.  Characterization of the interactions between mammalian PAZ PIWI domain proteins and Dicer.

Authors:  Nasser Tahbaz; Fabrice A Kolb; Haidi Zhang; Katarzyna Jaronczyk; Witold Filipowicz; Tom C Hobman
Journal:  EMBO Rep       Date:  2004-01-16       Impact factor: 8.807

3.  The carboxy-terminal, M3 motifs of PACT and TRBP have opposite effects on PKR activity.

Authors:  Vishal Gupta; Xu Huang; Rekha C Patel
Journal:  Virology       Date:  2003-10-25       Impact factor: 3.616

4.  Organization of the human tarbp2 gene reveals two promoters that are repressed in an astrocytic cell line.

Authors:  S Bannwarth; L Talakoub; F Letourneur; M Duarte; D F Purcell; J Hiscott; A Gatignol
Journal:  J Biol Chem       Date:  2001-10-18       Impact factor: 5.157

5.  TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing.

Authors:  Thimmaiah P Chendrimada; Richard I Gregory; Easwari Kumaraswamy; Jessica Norman; Neil Cooch; Kazuko Nishikura; Ramin Shiekhattar
Journal:  Nature       Date:  2005-06-22       Impact factor: 49.962

6.  The TAR RNA-binding protein, TRBP, stimulates the expression of TAR-containing RNAs in vitro and in vivo independently of its ability to inhibit the dsRNA-dependent kinase PKR.

Authors:  Dominique Dorin; Marion C Bonnet; Sylvie Bannwarth; Anne Gatignol; Eliane F Meurs; Catherine Vaquero
Journal:  J Biol Chem       Date:  2002-12-09       Impact factor: 5.157

7.  R2D2, a bridge between the initiation and effector steps of the Drosophila RNAi pathway.

Authors:  Qinghua Liu; Tim A Rand; Savitha Kalidas; Fenghe Du; Hyun-Eui Kim; Dean P Smith; Xiaodong Wang
Journal:  Science       Date:  2003-09-26       Impact factor: 47.728

8.  Merlin, a tumor suppressor, interacts with transactivation-responsive RNA-binding protein and inhibits its oncogenic activity.

Authors:  Joo Yong Lee; Hongtae Kim; Chung Hun Ryu; Jae Young Kim; Byung Hyune Choi; Young Lim; Pil-Woo Huh; Young-Hoon Kim; Kweon-Haeng Lee; Tae-Youn Jun; Hyung Kyun Rha; Joon-Ki Kang; Chang Rak Choi
Journal:  J Biol Chem       Date:  2004-04-27       Impact factor: 5.157

9.  Dicer is essential for mouse development.

Authors:  Emily Bernstein; Sang Yong Kim; Michelle A Carmell; Elizabeth P Murchison; Heather Alcorn; Mamie Z Li; Alea A Mills; Stephen J Elledge; Kathryn V Anderson; Gregory J Hannon
Journal:  Nat Genet       Date:  2003-10-05       Impact factor: 38.330

10.  Normal microRNA maturation and germ-line stem cell maintenance requires Loquacious, a double-stranded RNA-binding domain protein.

Authors:  Klaus Förstemann; Yukihide Tomari; Tingting Du; Vasily V Vagin; Ahmet M Denli; Diana P Bratu; Carla Klattenhoff; William E Theurkauf; Phillip D Zamore
Journal:  PLoS Biol       Date:  2005-05-24       Impact factor: 8.029

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  314 in total

1.  Specific requirement of DRB4, a dsRNA-binding protein, for the in vitro dsRNA-cleaving activity of Arabidopsis Dicer-like 4.

Authors:  Akihito Fukudome; Akihiro Kanaya; Mai Egami; Yukihiro Nakazawa; Akihiro Hiraguri; Hiromitsu Moriyama; Toshiyuki Fukuhara
Journal:  RNA       Date:  2011-01-26       Impact factor: 4.942

2.  Dicer is dispensable for asymmetric RISC loading in mammals.

Authors:  Juan G Betancur; Yukihide Tomari
Journal:  RNA       Date:  2011-11-21       Impact factor: 4.942

3.  Evidence for a cytoplasmic microprocessor of pri-miRNAs.

Authors:  Jillian S Shapiro; Ryan A Langlois; Alissa M Pham; Benjamin R Tenoever
Journal:  RNA       Date:  2012-05-25       Impact factor: 4.942

Review 4.  Mechanisms of control of microRNA biogenesis.

Authors:  Brandi N Davis-Dusenbery; Akiko Hata
Journal:  J Biochem       Date:  2010-09-09       Impact factor: 3.387

5.  MicroRNAs, macrocontrol: regulation of miRNA processing.

Authors:  Izabella Slezak-Prochazka; Selvi Durmus; Bart-Jan Kroesen; Anke van den Berg
Journal:  RNA       Date:  2010-04-27       Impact factor: 4.942

6.  Enhanced gene silencing in cells cured of persistent virus infection by RNA interference.

Authors:  Isabelle Pelletier; Aure Saulnier; Cynthia Brisac; Sophie Jegouic; Nicolas Vabret; Frédéric Tangy; Bruno Blondel; Florence Colbère-Garapin
Journal:  J Virol       Date:  2010-04-14       Impact factor: 5.103

Review 7.  MicroRNAs as a molecular basis for mental retardation, Alzheimer's and prion diseases.

Authors:  Patrick Provost
Journal:  Brain Res       Date:  2010-03-27       Impact factor: 3.252

8.  Minor-groove-modulating adenosine replacements control protein binding and RNAi activity in siRNAs.

Authors:  Hayden Peacock; Erik Fostvedt; Peter A Beal
Journal:  ACS Chem Biol       Date:  2010-10-07       Impact factor: 5.100

9.  TRIM65 regulates microRNA activity by ubiquitination of TNRC6.

Authors:  Shitao Li; Lingyan Wang; Bishi Fu; Michael A Berman; Alos Diallo; Martin E Dorf
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-28       Impact factor: 11.205

Review 10.  Involvement of Dcr1 in post-transcriptional regulation of gene expression in Schizosaccharomyces pombe.

Authors:  Lise-Andree Gobeil; Pierre Plante; Mina Rohani; Marc Ouellette; Patrick Provost
Journal:  Front Biosci       Date:  2008-01-01
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