Literature DB >> 16141058

RNA structure: reading the ribosome.

Harry F Noller1.   

Abstract

The crystal structures of the ribosome and its subunits have increased the amount of information about RNA structure by about two orders of magnitude. This is leading to an understanding of the principles of RNA folding and of the molecular interactions that underlie the functional capabilities of the ribosome and other RNA systems. Nearly all of the possible types of RNA tertiary interactions have been found in ribosomal RNA. One of these, an abundant tertiary structural motif called the A-minor interaction, has been shown to participate in both aminoacyl-transfer RNA selection and in peptidyl transferase; it may also play an important role in the structural dynamics of the ribosome.

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Year:  2005        PMID: 16141058     DOI: 10.1126/science.1111771

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  140 in total

1.  Another burst of smoke: atomic resolution structures of RF3 bound to the ribosome.

Authors:  Megan E McDonald; Rachel Green
Journal:  RNA       Date:  2012-02-17       Impact factor: 4.942

2.  Domain III of the T. thermophilus 23S rRNA folds independently to a near-native state.

Authors:  Shreyas S Athavale; J Jared Gossett; Chiaolong Hsiao; Jessica C Bowman; Eric O'Neill; Eli Hershkovitz; Thanawadee Preeprem; Nicholas V Hud; Roger M Wartell; Stephen C Harvey; Loren Dean Williams
Journal:  RNA       Date:  2012-02-14       Impact factor: 4.942

3.  Functional elucidation of a key contact between tRNA and the large ribosomal subunit rRNA during decoding.

Authors:  Rodrigo F Ortiz-Meoz; Rachel Green
Journal:  RNA       Date:  2010-08-25       Impact factor: 4.942

4.  The transition from noncoded to coded protein synthesis: did coding mRNAs arise from stability-enhancing binding partners to tRNA?

Authors:  Harold Stephen Bernhardt; Warren Perry Tate
Journal:  Biol Direct       Date:  2010-04-09       Impact factor: 4.540

5.  On the role of Hoogsteen:Hoogsteen interactions in RNA: ab initio investigations of structures and energies.

Authors:  Purshotam Sharma; Mohit Chawla; Sitansh Sharma; Abhijit Mitra
Journal:  RNA       Date:  2010-03-30       Impact factor: 4.942

Review 6.  Roles of DEAD-box proteins in RNA and RNP Folding.

Authors:  Cynthia Pan; Rick Russell
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

7.  The Ribosome Comes Alive.

Authors:  Joachim Frank
Journal:  Isr J Chem       Date:  2010-06-18       Impact factor: 3.333

8.  RNA folding: A clear path to RNA catalysis.

Authors:  Amanda Solem; Alain Laederach
Journal:  Nat Chem Biol       Date:  2015-12       Impact factor: 15.040

9.  History of the ribosome and the origin of translation.

Authors:  Anton S Petrov; Burak Gulen; Ashlyn M Norris; Nicholas A Kovacs; Chad R Bernier; Kathryn A Lanier; George E Fox; Stephen C Harvey; Roger M Wartell; Nicholas V Hud; Loren Dean Williams
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-30       Impact factor: 11.205

Review 10.  Ribosomal translocation: one step closer to the molecular mechanism.

Authors:  Shinichiro Shoji; Sarah E Walker; Kurt Fredrick
Journal:  ACS Chem Biol       Date:  2009-02-20       Impact factor: 5.100

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