Literature DB >> 16076217

Synthesis of MFe3S4 clusters containing a planar M(II) site (M = Ni, Pd, Pt), a structural element in the C-cluster of carbon monoxide dehydrogenase.

Rashmishree Panda1, Curtis P Berlinguette, Yugen Zhang, Richard H Holm.   

Abstract

Synthesis of an analogue of the C-cluster of C. hydrogenoformans carbon monoxide dehydrogenase requires formation of a planar Ni(II) site and attachment of an exo iron atom in the core unit NiFe(4)S(5). The first objective has been achieved by two reactions: (i) displacement of Ph(3)P or Bu(t)()NC at tetrahedral Ni(II) sites of cubane-type [NiFe(3)S(4)](+) clusters with chelating diphosphines, and (ii) metal atom incorporation into a cuboidal [Fe(3)S(4)](0) cluster with a M(0) reactant in the presence of bis(1,2-dimethylphosphino)ethane (dmpe). The isolated product clusters [(dmpe)MFe(3)S(4)(LS(3))](2-) (M = Ni(II) (9), Pd(II) (12), Pt(II) (13); LS(3) = 1,3,5-tris((4,6-dimethyl-3-mercaptophenyl)thio)-2,4,6-tris(p-tolylthio)benzene(3-)) contain the cores [MFe(3)(mu(2)-S)(mu(3)-S)(3)](+) having planar M(II)P(2)S(2) sites and variable nonbonding M...S distances of 2.6-3.4 A. Reaction (i) involves a tetrahedral --> planar Ni(II) structural change between isomeric cubane and cubanoid [NiFe(3)S(4)](+) cores. Based on the magnetic properties of 12 and earlier considerations, the S = (5)/(2) ground state of the cubanoid cluster arises from the [Fe(3)S(4)](-) fragment, whereas the S = (3)/(2) ground state of the cubane cluster is a consequence of antiferromagnetic coupling between the spins of Ni(2+) (S = 1) and [Fe(3)S(4)](-). Other substitution reactions of [NiFe(3)S(4)](+) clusters and 1:3 site-differentiated [Fe(4)S(4)](2+) clusters are described, as are the structures of 12, 13, [(Me(3)P)NiFe(3)S(4)(LS(3))](2-), and [Fe(4)S(4)(LS(3))L'](2-) (L' = Me(2)NC(2)H(4)S(-), Ph(2)P(O)C(2)H(4)S(-)). This work significantly expands our initial report of cluster 9 (Panda et al. J. Am. Chem. Soc. 2004, 126, 6448-6459) and further demonstrates that a planar M(II) site can be stabilized within a cubanoid [NiFe(3)S(4)](+) core.

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Year:  2005        PMID: 16076217      PMCID: PMC2631389          DOI: 10.1021/ja052381s

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  19 in total

Review 1.  The Ni-containing carbon monoxide dehydrogenase family: light at the end of the tunnel?

Authors:  Paul A Lindahl
Journal:  Biochemistry       Date:  2002-02-19       Impact factor: 3.162

2.  Nickel-Containing Carbon Monoxide Dehydrogenase/Acetyl-CoA Synthase(,).

Authors:  Stephen W. Ragsdale; Manoj Kumar
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

Review 3.  Synthetic analogues of the active sites of iron-sulfur proteins.

Authors:  P Venkateswara Rao; R H Holm
Journal:  Chem Rev       Date:  2004-02       Impact factor: 60.622

4.  On [Fe4S4]2+ -(mu2-SR)-M II bridge formation in the synthesis of an A-cluster analogue of carbon monoxide dehydrogenase/acetylcoenzyme A synthase.

Authors:  P Venkateswara Rao; Sumit Bhaduri; Jianfeng Jiang; Daewon Hong; R H Holm
Journal:  J Am Chem Soc       Date:  2005-02-16       Impact factor: 15.419

5.  Carbon monoxide induced decomposition of the active site [Ni-4Fe-5S] cluster of CO dehydrogenase.

Authors:  Holger Dobbek; Vitali Svetlitchnyi; Jago Liss; Ortwin Meyer
Journal:  J Am Chem Soc       Date:  2004-05-05       Impact factor: 15.419

6.  Initial structure modification of tetrahedral to planar nickel(II) in a nickel-iron-sulfur cluster related to the C-cluster of carbon monoxide dehydrogenase.

Authors:  Rashmishree Panda; Yugen Zhang; Craig C McLauchlan; P Venkateswara Rao; F A Tiago de Oliveira; E Münck; R H Holm
Journal:  J Am Chem Soc       Date:  2004-05-26       Impact factor: 15.419

7.  Inactivation of acetyl-CoA synthase/carbon monoxide dehydrogenase by copper.

Authors:  Matthew R Bramlett; Xiangshi Tan; Paul A Lindahl
Journal:  J Am Chem Soc       Date:  2003-08-06       Impact factor: 15.419

8.  Effect of sodium sulfide on Ni-containing carbon monoxide dehydrogenases.

Authors:  Jian Feng; Paul A Lindahl
Journal:  J Am Chem Soc       Date:  2004-07-28       Impact factor: 15.419

9.  Sulfur bridging interactions of cis-planar NiII-S2N2 coordination units with nickel(II), copper(I,II), zinc(II), and mercury(II): a library of bridging modes, including NiII(micro2-SR)2MI,II rhombs.

Authors:  P Venkateswara Rao; Sumit Bhaduri; Jianfeng Jiang; R H Holm
Journal:  Inorg Chem       Date:  2004-09-20       Impact factor: 5.165

10.  Evidence that NiNi acetyl-CoA synthase is active and that the CuNi enzyme is not.

Authors:  Javier Seravalli; Yuming Xiao; Weiwei Gu; Stephen P Cramer; William E Antholine; Vladimir Krymov; Gary J Gerfen; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2004-04-06       Impact factor: 3.162

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  9 in total

1.  VFe3S4 single and double cubane clusters: synthesis, structures, and dependence of redox potentials and electron distribution on ligation and heterometal.

Authors:  Thomas A Scott; R H Holm
Journal:  Inorg Chem       Date:  2008-04-21       Impact factor: 5.165

2.  Specific incorporation of chalcogenide bridge atoms in molybdenum/tungsten-iron-sulfur single cubane clusters.

Authors:  Amit Majumdar; R H Holm
Journal:  Inorg Chem       Date:  2011-10-10       Impact factor: 5.165

3.  Reactions of the terminal Ni(II)-OH group in substitution and electrophilic reactions with carbon dioxide and other substrates: structural definition of binding modes in an intramolecular Ni(II)...Fe(II) bridged site.

Authors:  Deguang Huang; R H Holm
Journal:  J Am Chem Soc       Date:  2010-04-07       Impact factor: 15.419

Review 4.  Metal centers in the anaerobic microbial metabolism of CO and CO2.

Authors:  Güneş Bender; Elizabeth Pierce; Jeffrey A Hill; Joseph E Darty; Stephen W Ragsdale
Journal:  Metallomics       Date:  2011-06-06       Impact factor: 4.526

5.  The [MoFe3S4]2+ oxidation state: synthesis, substitution reactions, and structures of phosphine-ligated cubane-type clusters with the S=2 ground state.

Authors:  Bin Xi; R H Holm
Journal:  Inorg Chem       Date:  2011-06-07       Impact factor: 5.165

6.  Synthesis of binucleating macrocycles and their nickel(II) hydroxo- and cyano-bridged complexes with divalent ions: anatomical variation of ligand features.

Authors:  Xiaofeng Zhang; Deguang Huang; Yu-Sheng Chen; R H Holm
Journal:  Inorg Chem       Date:  2012-10-03       Impact factor: 5.165

7.  Biomimetic chemistry of iron, nickel, molybdenum, and tungsten in sulfur-ligated protein sites.

Authors:  Stanislav Groysman; R H Holm
Journal:  Biochemistry       Date:  2009-03-24       Impact factor: 3.162

8.  Carbon dioxide binding at a Ni/Fe center: synthesis and characterization of Ni(η1-CO2C) and Ni-μ-CO2C2O,O'-Fe.

Authors:  Changho Yoo; Yunho Lee
Journal:  Chem Sci       Date:  2016-08-30       Impact factor: 9.825

Review 9.  Biomimetic Approach to CO2 Reduction.

Authors:  Ilaria Gamba
Journal:  Bioinorg Chem Appl       Date:  2018-08-01       Impact factor: 7.778

  9 in total

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